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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR01G00690.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 279aa MW: 29293.9 Da PI: 7.568 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR01G00690.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 29.7 | 1.2e-09 | 196 | 239 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
++ + RR+ri +++ L++l+P+ +K++ +++LekA++Y+k Lq
LPERR01G00690.1 196 AAAKVRRERISERLKVLQDLVPNG-----TKVDLVTMLEKAINYVKFLQ 239
56799*****************97.....8******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MAAQASSKRA MAAPREMMYD DDEASMPLEL FGYHGGNGGC VDADYYYSWS GSSSSSSSSV 60 LSFDQAAAGG GCGRQQLAFH HSITGAGDDE CAMWMDAAAG MVVDHHPSVA GHNFGFVSSP 120 AGSPAAEMGI EIHDSSVVSK PPATAKTAQK RSCPPGGEVR AAGKKQCRKG SKGSKAASAP 180 APAPALTKDK DQPQSAAAKV RRERISERLK VLQDLVPNGT KVDLVTMLEK AINYVKFLQL 240 QVKVLATDEF WPAQGGKAPE LSQVKDALDA ILSSQHPNK
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK108587 | 1e-123 | AK108587.1 Oryza sativa Japonica Group cDNA clone:002-146-B03, full insert sequence. |