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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR01G00520.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 210aa MW: 22850.9 Da PI: 10.1009 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR01G00520.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 27.5 | 5.7e-09 | 34 | 83 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+e+ErrRR++++ +L +l+Pk +++ + + + +A YIk+L
LPERR01G00520.1 34 RKEMERRRRQDMKGLCLKLASLIPKEHYSKGGMRTQLSSVDEAAAYIKKL 83
579**********************76899999***************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MEKGGSSSSS RRRSRATVST SSGSVSSTAA AAERKEMERR RRQDMKGLCL KLASLIPKEH 60 YSKGGMRTQL SSVDEAAAYI KKLKERVDEL PHRRSIAMGN GGVAISPSTS GSGGSSEDVI 120 TGEKTVLEVR QHVQEGSSSL DVVLICSVER PVKFHEVITV LEEEGAEIVH ANFSVAAHKI 180 YYTIFSRAFS SRIGIEASRI TERLRALVIQ
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP002845 | 5e-44 | AP002845.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0482C06. |
GenBank | AP014957 | 5e-44 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |