PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bZIP

Protein Properties

Length: 365aa MW: 40242.6 Da PI: 9.8858

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
LOC_Os11g11100.1	genome	MSU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.5	5.1e-07	232	277	17	62
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 A+rsR RK+++i+eLe+kv++L++e + e+e l+++ l+ e LOC_Os11g11100.1 232 AQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDLE 277 89***********************999999999888887666655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-5	221	280	IPR004827	Basic-leucine zipper domain
CDD	cd14703	3.43E-15	222	272	No hit	No description
SuperFamily	SSF57959	6.88E-6	231	274	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.7E-7	232	274	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Plant Ontology ? help Back to Top
PO Term	PO Category	PO Description
PO:0020039	anatomy	leaf lamina

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence Send to blast
MMMANAKLPK QALLPPRSPF PTAAAAAGPY AGDHGPIARP QGAPHHRHGH GHGHHQRTSS 60 ESFIEEQPSW LDDLLNEPET PVRQHGRAGH RRSSSDSFAM FDGGAAAGAY ANGFEGMGGG 120 GGGGQAAPWG GVQEYYAKPS SFGRHQGRPW EQGMNNLVNY RQSGGPPMPA KEKVGGHHGS 180 PSVLRDHDHG MDRRSSDESG HDQKVGPERK EGVPPKHAQS EADTKRAKQQ YAQRSRVRKL 240 QYIAELERKV QALQSEGIDV SAEMEFLSQQ NIMLDLENKA LKQRLESLAQ EQLIKRFQQE 300 MFEREIGRLR SLYQQQQQQQ KQPQPTTTLS RSNSRDLDSQ FANLSLKHKD PNSGPLRTQS 360 SSIL*

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence Send to blast

MMMANAKLPK QALLPPRSPF PTAAAAAGPY AGDHGPIARP QGAPHHRHGH GHGHHQRTSS  60
ESFIEEQPSW LDDLLNEPET PVRQHGRAGH RRSSSDSFAM FDGGAAAGAY ANGFEGMGGG  120
GGGGQAAPWG GVQEYYAKPS SFGRHQGRPW EQGMNNLVNY RQSGGPPMPA KEKVGGHHGS  180
PSVLRDHDHG MDRRSSDESG HDQKVGPERK EGVPPKHAQS EADTKRAKQQ YAQRSRVRKL  240
QYIAELERKV QALQSEGIDV SAEMEFLSQQ NIMLDLENKA LKQRLESLAQ EQLIKRFQQE  300
MFEREIGRLR SLYQQQQQQQ KQPQPTTTLS RSNSRDLDSQ FANLSLKHKD PNSGPLRTQS  360
SSIL*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Os.23107	0.0	callus\| flower\| leaf\| panicle\| root\| seed\| stem

Expression -- Microarray ? help Back to Top
Source	ID	E-value
GEO	32982290	0.0
Expression Atlas	Q2R8T2	-

Cis-element ? help Back to Top
Source	Link
PlantRegMap	LOC_Os11g11100.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Phenotype -- Mutation ? help Back to Top
Source	ID
RiceGE	Os11g11100

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK072267	0.0	AK072267.1 Oryza sativa Japonica Group cDNA clone:J023004I18, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015617316.1	0.0	uncharacterized protein At4g06598
TrEMBL	A0A0E0IZQ5	0.0	A0A0E0IZQ5_ORYNI; Uncharacterized protein
TrEMBL	A0A0E0R5W5	0.0	A0A0E0R5W5_ORYRU; Uncharacterized protein
TrEMBL	Q2R8T2	0.0	Q2R8T2_ORYSJ; BZIP transcription factor family protein, expressed
STRING	ORUFI11G07090.1	0.0	(Oryza rufipogon)
STRING	OS11T0218000-01	0.0	(Oryza sativa)
STRING	ONIVA11G06910.2	0.0	(Oryza nivara)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3310	36	66
Representative plant	OGRP4252	12	19

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	5e-57	bZIP family protein

Link Out ? help Back to Top
Phytozome	LOC_Os11g11100.1
Entrez Gene	4350088

Publications ? help Back to Top
Rice Chromosomes 11 and 12 Sequencing Consortia The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications. BMC Biol., 2005. 3: p. 20 [PMID:16188032]