PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bZIP

Protein Properties

Length: 395aa MW: 41204 Da PI: 6.6304

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
LOC_Os11g05640.1	genome	MSU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.7	3.4e-10	124	186	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke kr rr NRe+Ar +R++a +eL++kv+ L+++N+++kke + +e+ +lk + LOC_Os11g05640.1 124 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNETMKKEKDVVMQEYLSLKETN 186 89*********************************************************9877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.2E-12	124	188	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.1E-9	124	186	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.979	126	189	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.6E-5	128	192	No hit	No description
SuperFamily	SSF57959	8.84E-7	128	184	No hit	No description
CDD	cd14702	2.54E-13	129	179	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence Send to blast
MSDHSSSDGQ RQCRRRGVGV DVELDAAMAL ADMAGAAPGQ PEASPPPHAT QEAAAAAVAK 60 GEQEDEAEMA STRLSLELGK VGIQSSPPCS SSSSAGHPAM QPAAAATAAP GYGPRPRHML 120 TEAEKEAKRL RRVLANRESA RQTILRRQAI RDELARKVAD LSSQNETMKK EKDVVMQEYL 180 SLKETNKQLK EQVAIRTIKK AAVAEPMDTA PPAQQQAETA AAVAPPTTAT PPSTAPQPSF 240 LYTAAPAGVA PVPYVWGSWP PCGPTGYEPP PPLCLPPCAW YYPVVADPRV SSPPTSTYPQ 300 SYQEQPTSSP GGGTAEEDTD DDPCSLTLAI DVDKRSAPGA GGSAAGAGQH ASISDREKAT 360 AAAEARKRRK ELTKLKQMHG GGGGSRPGGG GEHW*

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence Send to blast

MSDHSSSDGQ RQCRRRGVGV DVELDAAMAL ADMAGAAPGQ PEASPPPHAT QEAAAAAVAK  60
GEQEDEAEMA STRLSLELGK VGIQSSPPCS SSSSAGHPAM QPAAAATAAP GYGPRPRHML  120
TEAEKEAKRL RRVLANRESA RQTILRRQAI RDELARKVAD LSSQNETMKK EKDVVMQEYL  180
SLKETNKQLK EQVAIRTIKK AAVAEPMDTA PPAQQQAETA AAVAPPTTAT PPSTAPQPSF  240
LYTAAPAGVA PVPYVWGSWP PCGPTGYEPP PPLCLPPCAW YYPVVADPRV SSPPTSTYPQ  300
SYQEQPTSSP GGGTAEEDTD DDPCSLTLAI DVDKRSAPGA GGSAAGAGQH ASISDREKAT  360
AAAEARKRRK ELTKLKQMHG GGGGSRPGGG GEHW*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	365	370	RKRRKE

Expression -- Microarray ? help Back to Top
Source	ID	E-value
GEO	156764520	0.0
Expression Atlas	A0A0N7KSG4	-

Cis-element ? help Back to Top
Source	Link
PlantRegMap	LOC_Os11g05640.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Phenotype -- Mutation ? help Back to Top
Source	ID
RiceGE	Os11g05640

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK287905	0.0	AK287905.1 Oryza sativa Japonica Group cDNA, clone: J065211O07, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015615785.1	0.0	uncharacterized protein LOC4349815
TrEMBL	A0A0N7KSG4	0.0	A0A0N7KSG4_ORYSJ; Os11g0154900 protein
STRING	OS11T0154900-01	0.0	(Oryza sativa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3165	34	75
Representative plant	OGRP4569	13	18

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	3e-17	bZIP family protein

Link Out ? help Back to Top
Phytozome	LOC_Os11g05640.1
Entrez Gene	4349815

Publications ? help Back to Top
Nantel A,Quatrano RS Characterization of three rice basic/leucine zipper factors, including two inhibitors of EmBP-1 DNA binding activity. J. Biol. Chem., 1996. 271(49): p. 31296-305 [PMID:8940135]