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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LOC_Os05g45230.1 |
Common Name | OsJ_19286 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family |
WRKY |
Protein Properties |
Length: 182aa MW: 18481.3 Da PI: 4.6311 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LOC_Os05g45230.1 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 33.4 | 9.1e-11 | 128 | 148 | 1 | 21 |
---SS-EEEEEEE--TT-SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefp 21
ldDgy+WrKYGqK vk+s+fp
LOC_Os05g45230.1 128 LDDGYRWRKYGQKAVKNSDFP 148
59*****************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 182 aa
Download sequence Send
to blast |
MDGLEAAAGD QQHGRLLIPQ LPAAYLASSS MAALSPAGDD WAASLILPDG GSAAAGVGED 60 DLGGGVMAAA AAESSCGGSS TVTSSGVTEA AAAAATTTRR GRGNGKKAGG GGRTPRFAFH 120 TRSENDILDD GYRWRKYGQK AVKNSDFPSD DELLLFSDVD NTQTATENLR FIPLGRVYIT 180 G*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC108499 | 0.0 | AC108499.3 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OJ1187_E11, complete sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |