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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LOC_Os03g60630.1 |
Common Name | OJ1754_E06.26 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family |
Dof |
Protein Properties |
Length: 356aa MW: 35104 Da PI: 9.7068 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LOC_Os03g60630.1 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 123.2 | 8.8e-39 | 55 | 115 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+e lkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++
LOC_Os03g60630.1 55 PEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 115
56789*****************************************************987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MPPHHGGLMA PRPDMVAAAV AASGGGGGGG GPTGGTAVRP GSMTERARLA KIPQPEPGLK 60 CPRCESTNTK FCYFNNYSLS QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NKRTKSSKSS 120 SSTSAAGSAS ATGGTSSSTS STATGGSSSA AAAAAMMPPQ AQLPFLASLH HPLGGGDHYS 180 SGASRLGFPG LSSLDPVDYQ LGGGAAAAAA IGLEQWRLPQ IQQFPFLSRN DAMPPPMSGI 240 YPFDAEAAAD AAGFAGQLLA GTKVPGSSGL ITQLASVKME DSNAQSAAMN SSPREFLGLP 300 GNLQFWGGGN GAGPGGNGDG ATGGSGAGVA PGGGGSGGGW ADLSGFNSSS SGNIL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC104433 | 0.0 | AC104433.8 Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence. |
GenBank | AP014959 | 0.0 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |