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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LOC_Os02g47060.1 |
Common Name | LOC4330420, Os02g0698800, OSNPB_020698800, P0459B01.19 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family |
WRKY |
Protein Properties |
Length: 507aa MW: 51766.5 Da PI: 6.1521 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LOC_Os02g47060.1 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.5 | 8.7e-31 | 239 | 297 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
LOC_Os02g47060.1 239 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 297
699************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 507 aa
Download sequence Send
to blast |
MCDYFLQRME GEQAAGDLAD IVLRAGGAAA AAVAGGGIPS TEWQLPPAEE EEEEPGLFPL 60 PPSSSDGSGM SGADAFGDPF AGLPDPFGGD YPSSGGAAAA ADFFDAVVAK AGFVDVGVLG 120 GGGGGGCDGG GVDGGGGGSS LLGMSKPILP RAAMQLPSVS PRAIRPYPVM AGDTVKLGAP 180 MAGGPCAFDG AAAAGLHMSS SPRGAVGGIK RRKNQARKVV CIPAPAAAGG RTSGEVVPSD 240 LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC SARKQVERSR TDPNMLVITY TSEHNHPWPT 300 QRNALAGSTR SHHAKNSSSN SSSSGASSAS KNNSSHSGYH HHHHQKPLVK AEPNDQSAAA 360 TTAATVPVKE EAAMVGTSSE ALAKTTQKSM EDAAAAASAT AAAVEHSDLM QQMFSQSYRP 420 MIPEAAAGGH HDDFFADLAE LESDPMSLIF SKEYMATNYK PAGDPAGKEM NAVDKGLDPA 480 YMLDWSSTTV VTRAGGSSFM QGEGGL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK073100 | 0.0 | AK073100.1 Oryza sativa Japonica Group cDNA clone:J033016K09, full insert sequence. |