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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LOC_Os02g34370.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family |
bHLH |
Protein Properties |
Length: 348aa MW: 36037.6 Da PI: 7.442 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LOC_Os02g34370.1 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 23.5 | 9.7e-08 | 94 | 118 | 7 | 31 |
HHHHHHHHHHHHHHHHHHCTSCCC. CS
HLH 7 erErrRRdriNsafeeLrellPkas 31
rEr RR+r+N+ f+ +r+l+P+++
LOC_Os02g34370.1 94 VRERERRRRMNDMFAGIRRLVPNLP 118
59*********************64 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MSQEEQRHGR QLPLATSGVI TFNGVPLSPL TAGAESDGDD DDVVIVDACN NGKRKVGDGE 60 EEGRGSQGGD DDDDVVAVHG GGGGGGNRAC MFAVRERERR RRMNDMFAGI RRLVPNLPEK 120 GEEVRMEAQK QELQRERDRL AMEVAAAAGG AGASSSSSSA AAAAVTVAAY GPAGAVGSSS 180 SSAAAAARAN TVVPVPQRAA RGATAPTPRP VAPPQAGTWP LPAPAAMPPP PPPPTGAAAV 240 APPPSLKTWS WGDNVVVSVL GNIGNMTVRA PLRRTGVLAM ASAALKRYNI TAVTSLSGTD 300 ASRTQNMFMF YTIIDMPDRQ PQFVHPKVFE AMYRAAAAEI AAWINCY*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP005611 | 0.0 | AP005611.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |