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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LOC_Os02g16540.1 |
Common Name | LOC4328953, Os02g0265200, OsJ_06167, OSNPB_020265200, P0006C08.18-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family |
WRKY |
Protein Properties |
Length: 362aa MW: 38242.5 Da PI: 4.7227 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LOC_Os02g16540.1 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 98.7 | 3.8e-31 | 175 | 233 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++ tY+geHnh+
LOC_Os02g16540.1 175 ADVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRSDPNTFILTYTGEHNHS 233
69*************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0007263 | Biological Process | nitric oxide mediated signal transduction |
GO:0009739 | Biological Process | response to gibberellin |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MEEELCGNNW DLDAVVRLGC CRRRISPAAV AQQVDPFASF LQQGVAMEVA AEKEVGVEAA 60 WSFPELTVRD GGGGGLGRDA DELLKAFCAA FPSSSSSKSS PLPTPPPPPP TQPQPEQQKP 120 VTVQENLPAP TTAPARASQP AAARQVPAGG VPRSKRRKNQ QKKVVRHVPA DGVSADVWAW 180 RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRSDPN TFILTYTGEH NHSAPTHRNS 240 LAGTTRNKLP SSSAASAASA QPQPPPPSVV VVGAGGGGAE AAGLSPTTPL RTPSMEEDEE 300 EEEEEELLVE DMEMAGEDEL LFLNGGDDNA ALDGTPMSSL FDIADEPFLP SPWTEPTAAG 360 S*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK066775 | 0.0 | AK066775.1 Oryza sativa Japonica Group cDNA clone:J013074N21, full insert sequence. |