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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LOC_Os02g15760.1 |
Common Name | Os02g0257500, OSNPB_020257500, P0613F08.25 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family |
bHLH |
Protein Properties |
Length: 416aa MW: 42283.9 Da PI: 7.826 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LOC_Os02g15760.1 | genome | MSU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 41.9 | 1.8e-13 | 131 | 181 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++h +Er+RR+++N+ ++ Lr+l+P + k+ + a+i +v+YIk+Lq
LOC_Os02g15760.1 131 KMSHITVERNRRKQMNEHLAVLRSLMPCF---YVKRGDQASIIGGVVDYIKELQ 181
789*************************9...9********************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 416 aa
Download sequence Send
to blast |
MADGGGGGLC ELFSDDHRDI RHVADADLFR ILETWEECIN GGAGGGGGGV SLAGVADQGA 60 AAASTGAGGG ARTTTTTTAA NGRRREGRDE EKGGGGGGGP PAQKKQKGSS SSSSSPAALA 120 AAVGDGDGAA KMSHITVERN RRKQMNEHLA VLRSLMPCFY VKRGDQASII GGVVDYIKEL 180 QQVLRSLEAK KNRKAYADQV LSPRPSPAAA ALMVKPTPPI SPRFAAAAAA GVPISPRTPT 240 PGSPYNKHAA AAATARPPHP AAATSSCSVA YSMSPAMTPT SSSSTTTTTT HELSPAPAFL 300 PILDSLVTEL AARGGASCRP LVIPSSAAAI AGIVGVPDVR VEFAGPNLVL KTVSHRAPGQ 360 ALKIIAALES LSLEILHVSI CTVDDATVLS FTIKIGIECE LSAEELVQEI QQTFL*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 82 | 106 | RRREGRDEEKGGGGGGGPPAQKKQK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004801 | 0.0 | AP004801.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0613F08. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |