PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Function |

Regulation |

Publication

Basic Information? help Back to Top

TF ID

Kalax.1449s0006.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

VOZ

Protein Properties

Length: 495aa MW: 55425.2 Da PI: 6.2708

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.1449s0006.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	433.9	2.3e-133	221	437	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspw 90 pppsaflgpkcalwdc+rpaqg +w+qdycssfha+la+neg+pg+tpvlrp+gi+lkd+llfaal akv+gk+vgipecegaat+kspw Kalax.1449s0006.1.p 221 PPPSAFLGPKCALWDCPRPAQGPDWCQDYCSSFHAALAFNEGPPGMTPVLRPNGIGLKDSLLFAALAAKVHGKDVGIPECEGAATTKSPW 310 89************************************************************************************** PP VOZ 91 naaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldal 180 na+elfdls+legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqv++efgglkrsyymdpqp++++ewhlyeyei+++d + Kalax.1449s0006.1.p 311 NAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVINEFGGLKRSYYMDPQPLKHYEWHLYEYEISKCDIC 400 ************************************************************************************** PP VOZ 181 alyrlelklvdekksakgkvskdsladlqkklgrlta 217 alyrlelkl+d+kk +kgk +dsladlqk++grlta Kalax.1449s0006.1.p 401 ALYRLELKLADGKKIPKGKTPSDSLADLQKQMGRLTA 437 *********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence Send to blast
MERPHERVYF RGFVGKLGIL PMGKGSRSNC KSTSHRMFRD KAKNKVDDLQ GIFADLQYAR 60 KESRTTDAAL LEEQVHQMLR EWRSELNEPS PATSLQGGSL GSFSSDICRL LQLYEEEEDD 120 ATSRLAAPKT EPDAAHSVQA QDVAIEQVTL TNQLPQEHSY QLGNNCKSSM AEMHNMGHNN 180 LGGVESREFQ LHQDFEKSFY ALPEEDVNVM PNADFLPNIC PPPSAFLGPK CALWDCPRPA 240 QGPDWCQDYC SSFHAALAFN EGPPGMTPVL RPNGIGLKDS LLFAALAAKV HGKDVGIPEC 300 EGAATTKSPW NAPELFDLSV LEGETIREWL FFDKPRRAFE SGNRKQRSLP DYNGRGWHES 360 RKQVINEFGG LKRSYYMDPQ PLKHYEWHLY EYEISKCDIC ALYRLELKLA DGKKIPKGKT 420 PSDSLADLQK QMGRLTAEFP SDHKFSAKGR IKIYPKDSHG HFATNQAAHA SDSGAGNGSA 480 PYYLVDNLDE YFLT*

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence Send to blast

MERPHERVYF RGFVGKLGIL PMGKGSRSNC KSTSHRMFRD KAKNKVDDLQ GIFADLQYAR  60
KESRTTDAAL LEEQVHQMLR EWRSELNEPS PATSLQGGSL GSFSSDICRL LQLYEEEEDD  120
ATSRLAAPKT EPDAAHSVQA QDVAIEQVTL TNQLPQEHSY QLGNNCKSSM AEMHNMGHNN  180
LGGVESREFQ LHQDFEKSFY ALPEEDVNVM PNADFLPNIC PPPSAFLGPK CALWDCPRPA  240
QGPDWCQDYC SSFHAALAFN EGPPGMTPVL RPNGIGLKDS LLFAALAAKV HGKDVGIPEC  300
EGAATTKSPW NAPELFDLSV LEGETIREWL FFDKPRRAFE SGNRKQRSLP DYNGRGWHES  360
RKQVINEFGG LKRSYYMDPQ PLKHYEWHLY EYEISKCDIC ALYRLELKLA DGKKIPKGKT  420
PSDSLADLQK QMGRLTAEFP SDHKFSAKGR IKIYPKDSHG HFATNQAAHA SDSGAGNGSA  480
PYYLVDNLDE YFLT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002273268.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	F6HM51	0.0	F6HM51_VITVI; Uncharacterized protein
STRING	VIT_10s0003g00500.t01	0.0	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	Kalax.1449s0006.1.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]