PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1442s0006.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 415aa    MW: 45366.8 Da    PI: 5.7205
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1442s0006.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.3e-10230277455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L+el+P +    sk   Ka +L + ++Y++sLq
  Kalax.1442s0006.1.p 230 SHSLAERVRREKISERMKYLQELVPGC----SKITGKAGMLDEIINYVQSLQ 277
                          8**************************....899*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.48E-10224281No hitNo description
SuperFamilySSF474591.14E-16224295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.599226276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.9E-17226294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-7230277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-9232282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MMLHCVNTSG GVSGGAELSV LERQRAHMKW QHQQQQGLEY GNVHSVLPGY GGVGNQVQGQ  60
VCGDSGVGQV GFPVVKPETG LDGTWTGFGN YGMPSVEDFM SCGYADNSGA EYSYQMMKNA  120
SCPVEISEGR DSILSGRTNL GDAEGAKKRK AENPASLKAV ADNGIKEKKI KEWAEDGESK  180
ITQPNTSINS KSKNKREASA DASKDNPKAP EVQKTDYIHV RARRGQATDS HSLAERVRRE  240
KISERMKYLQ ELVPGCSKIT GKAGMLDEII NYVQSLQRQV EFLSMKLATV NPQLNFSIES  300
LFGKEVFSPC TSSYPTLGKL SEMANTAYAQ FSHLEEAVSP GLDLGNYQPD MGLQRQLPEI  360
YVDPTSFNQI QQNPSTWDAE LQSLLAMEFQ GRSTSYPTQL FTGFAEASNL KMEI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018851563.11e-125PREDICTED: transcription factor bHLH63-like
TrEMBLA0A2I4H5X91e-124A0A2I4H5X9_JUGRE; transcription factor bHLH63-like
STRINGEMJ010631e-124(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.17e-57cryptochrome-interacting basic-helix-loop-helix 1