 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.1431s0004.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
DBB |
| Protein Properties |
Length: 193aa MW: 20798.4 Da PI: 6.0633 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.1431s0004.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 20.7 | 8.6e-07 | 4 | 47 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
C+ ++ e++ C ++ lC+ C ++ H H++vpl
Kalax.1431s0004.1.p 4 QCDSCGLAEAEVLCCADEAVLCAVCDEAVHTAnklsskHQRVPL 47
7******99*********************65889999999986 PP
|
| 2 | zf-B_box | 29.7 | 1.3e-09 | 59 | 100 | 4 | 39 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
+ C+ ++e + +fC +++ llC++C + +H+ H++
Kalax.1431s0004.1.p 59 PPCDICQERRGYIFCLEDRALLCRNCDVGTHNAnaytwaHRR 100
67*****************************76888888876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 193 aa
Download sequence Send
to blast |
MKIQCDSCGL AEAEVLCCAD EAVLCAVCDE AVHTANKLSS KHQRVPLLKR PPSTAACSPP 60
CDICQERRGY IFCLEDRALL CRNCDVGTHN ANAYTWAHRR LLITGVQVAL QSFSSAKHVG 120
KMECLSSWPS SSASPSGPGH RQEEQVLQGN GEMEMELAAS SSDTTAGFPS QQTHTAATGF 180
MDQWPAVQDI HY*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Acts as positive regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation, independently and in concert with HY5 and BBX21 (PubMed:18540109, PubMed:18796637, PubMed:18182030, PubMed:21427283). Acts as a positive regulator of de-etiolation and influences chloroplast biogenesis and function through regulation of genes encoding chloroplast proteins (PubMed:18182030). Acts downstream of COP1 and plays an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). Regulates the expression of genes responsive to light hormone signals which may contribute to optimal seedling development (PubMed:21427283). {ECO:0000269|PubMed:18182030, ECO:0000269|PubMed:18540109, ECO:0000269|PubMed:18796637, ECO:0000269|PubMed:21070414, ECO:0000269|PubMed:21427283}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By light. {ECO:0000269|PubMed:18182030}. |
