PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Function |

Regulation |

Publication

Basic Information? help Back to Top

TF ID

Kalax.1312s0003.3.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

VOZ

Protein Properties

Length: 488aa MW: 53804 Da PI: 5.1536

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.1312s0003.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	395.4	1.3e-121	211	425	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspw 90 ppp+aflg kcalwdc+rp q ++ qdyc+ +ha lalneg+ gt+pvlrp+gi+lkd+ lf+al+ak+qgkevgip+c+ga++a+spw Kalax.1312s0003.3.p 211 PPPAAFLGSKCALWDCPRPPQTFD--QDYCNDIHARLALNEGAAGTSPVLRPGGISLKDSILFDALKAKIQGKEVGIPQCDGAVSARSPW 298 89*****************998..7*********************************************************** PP VOZ 91 naaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldal 180 na+elfdlslleget+rewlffdkpr+afesgnrkqrslpdysgrgwhesrkqv+ke gglkrsyymdpqp s++ewhlyey i+++da Kalax.1312s0003.3.p 299 NAPELFDLSLLEGETLREWLFFDKPRKAFESGNRKQRSLPDYSGRGWHESRKQVVKESGGLKRSYYMDPQPVSHLEWHLYEYGIDKCDAQ 388 ************************************************************************************** PP VOZ 181 alyrlelklvdekksakgkvskdsladlqkklgrlta 217 alyrlelklvd+kk +kgkvskd++adlq ++g+lta Kalax.1312s0003.3.p 389 ALYRLELKLVDGKKKSKGKVSKDPVADLQTQMGKLTA 425 *********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence Send to blast
MQKDSKHKCN SASHKQLKSN AKNRLDELQD MFSSLQYARK EGQNNTVCEL EDQVNQMLKN 60 WKTELNETSS TSSLHGPGSS LGLDSADIRR LLLLSDEEDD ATSPLDESKA GQHSCGGQAL 120 HDGDGSFLFQ NNPSTNYILQ ERGFEGSNYV WPSMHDPNLK RNSQAQYHPF ELQPSAGGEF 180 IISSDNLDQN LLPAENVLHD FTGFLPAIVQ PPPAAFLGSK CALWDCPRPP QTFDQDYCND 240 IHARLALNEG AAGTSPVLRP GGISLKDSIL FDALKAKIQG KEVGIPQCDG AVSARSPWNA 300 PELFDLSLLE GETLREWLFF DKPRKAFESG NRKQRSLPDY SGRGWHESRK QVVKESGGLK 360 RSYYMDPQPV SHLEWHLYEY GIDKCDAQAL YRLELKLVDG KKKSKGKVSK DPVADLQTQM 420 GKLTADLPTE SKFPKMSLSE TGEAGDECSP STPFAPDQLT STAGSVDTGI SGVSDDYVNI 480 LTDCKRI*

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence Send to blast

MQKDSKHKCN SASHKQLKSN AKNRLDELQD MFSSLQYARK EGQNNTVCEL EDQVNQMLKN  60
WKTELNETSS TSSLHGPGSS LGLDSADIRR LLLLSDEEDD ATSPLDESKA GQHSCGGQAL  120
HDGDGSFLFQ NNPSTNYILQ ERGFEGSNYV WPSMHDPNLK RNSQAQYHPF ELQPSAGGEF  180
IISSDNLDQN LLPAENVLHD FTGFLPAIVQ PPPAAFLGSK CALWDCPRPP QTFDQDYCND  240
IHARLALNEG AAGTSPVLRP GGISLKDSIL FDALKAKIQG KEVGIPQCDG AVSARSPWNA  300
PELFDLSLLE GETLREWLFF DKPRKAFESG NRKQRSLPDY SGRGWHESRK QVVKESGGLK  360
RSYYMDPQPV SHLEWHLYEY GIDKCDAQAL YRLELKLVDG KKKSKGKVSK DPVADLQTQM  420
GKLTADLPTE SKFPKMSLSE TGEAGDECSP STPFAPDQLT STAGSVDTGI SGVSDDYVNI  480
LTDCKRI*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023908455.1	1e-169	transcription factor VOZ1
Swissprot	Q9SGQ0	1e-158	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1R3I163	1e-166	A0A1R3I163_COCAP; Uncharacterized protein
STRING	XP_010111154.1	1e-166	(Morus notabilis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-112	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	Kalax.1312s0003.3.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]