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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Kalax.1087s0007.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
AP2 |
Protein Properties |
Length: 420aa MW: 47125 Da PI: 7.2023 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.1087s0007.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.6 | 2.4e-16 | 85 | 143 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
++GV++++++gr++A+++d ++n+ k+ k+++lg +g +e Aa a++ a++k++g
Kalax.1087s0007.1.p 85 TFRGVTRHRWTGRYEAHLWDkNCWNQsqkKKgKQVYLGAYGDEEAAAHAYDLAALKYWG 143
69******************999988886448*************************98 PP
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2 | AP2 | 51.9 | 1.9e-16 | 186 | 237 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + +k+ +lg+f t eeAa+a++ a+ +++g
Kalax.1087s0007.1.p 186 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFATQEEAAEAYDMAAIEYRG 237
89****99**********988422...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 420 aa
Download sequence Send
to blast |
MPKLPHPDQN QMTRTNKDQM ESHNKKKKSE IKKDSADVIC TDNKLINIAA ALKVDAAVTN 60 KKKKQQPRRS RKAVPRDAPP QRTSTFRGVT RHRWTGRYEA HLWDKNCWNQ SQKKKGKQVY 120 LGAYGDEEAA AHAYDLAALK YWGPQSILNF PLSTYEEELK GMEDQSREEY IGSLRRKSSG 180 FSRGVSKYRG VARHHHNGRW EARIGRVLGN KYLYLGTFAT QEEAAEAYDM AAIEYRGLNA 240 VTNFDLSRYA KWLSCSHQEP NAHKSDCNLV SHNQLGHHQA ADSSLFTSPA ASLSENYTSE 300 DADEAALMNN TTSADQWGRR TQNSKEEEEF YPSYSNTTTT SAAATLSSGE DSDSKSSSTV 360 TNKRFFPDDI QTIFECTQQE SVSGMCAGTT DFIHIGSEDM IFGEAELSAY TSSLFDLDQ*
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