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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kalax.1071s0005.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
GATA |
| Protein Properties |
Length: 343aa MW: 38554.1 Da PI: 7.378 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.1071s0005.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 55.2 | 9.6e-18 | 228 | 262 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +C t kTp+WR gp g+ktLCnaCG++y++ +l
Kalax.1071s0005.1.p 228 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 262
99*****************************9885 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009416 | Biological Process | response to light stimulus |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MEALDFYQTG FCYRSGAPEK RLPNVDPIKQ EPFVVEEFLD FSNDEDHVAT ADVKLTPPAF 60
DGCHGLNSAE SSSVTAVDSC NGCNENSFSE PHVLGEIGQR SLLDRSFAGE LCVPHDDLAE 120
LEWLSTLQEE SFSSEDMQKL QLISGMAARA DIEPNKPNSS FRPKMPVPGK ARSKRSRAAP 180
GNWASHLLVL SPTTSTSENE RPLSPKTVTK RKDGRDRDRH APSDGRKCLH CATDKTPQWR 240
TGPMGPKTLC NACGVRYKSG RLVPEYRPAA SPTFVLTKHS NSHRKVLELR RQKEMHHRQP 300
QPHHLHHHHH HHFLHQSLIY DMSNGEDYLI HQHTGPDYRQ LI*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). Transcription activator involved in xylem formation. Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867). {ECO:0000250|UniProtKB:Q8LAU9, ECO:0000269|PubMed:25265867}. |
