PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kalax.1065s0002.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 273aa MW: 30387.5 Da PI: 7.8382

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.1065s0002.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.8	1.5e-09	21	89	2	70
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 Wt l+L++ +e + ++ + ++W+ +s+++++ g++r+ qC+ +w++l +y ik ++++ Kalax.1065s0002.1.p 21 WTLTDSLTLVNEIAAVEADCLDALSYYQKWKIISDNCAALGVNRTLDQCRRRWDSLFADYNSIKLWDED 89 888888888888888999999999999************************************998875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.713	21	77	IPR017877	Myb-like domain
Pfam	PF13837	3.7E-8	28	91	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009506	Cellular Component	plasmodesma

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence Send to blast
MPQKKTESAS RRTRSQVAPD WTLTDSLTLV NEIAAVEADC LDALSYYQKW KIISDNCAAL 60 GVNRTLDQCR RRWDSLFADY NSIKLWDEDG GGYWGLGRER RRGIGLPEEF DRDLFNAVDV 120 VVKGQVERAS SRHDAVLEDA DADPLGVISP PVFKKQNHQL TPQKRQIEVK KEKQIVGDKK 180 TGPMEVMATQ KGEKATSSSV EVMASQLREK AEMIQAILEG KIAENKDYTL SDLKQGAVSR 240 ANLARRQGDK LIDCFGAIGS TLDQLCKVTL TR*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	2e-53	sequence-specific DNA binding transcription factors

Link Out ? help Back to Top
Phytozome	Kalax.1065s0002.1.p