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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.1005s0011.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
NF-YC |
| Protein Properties |
Length: 268aa MW: 29353.5 Da PI: 4.7672 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.1005s0011.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 57.9 | 2.2e-18 | 6 | 86 | 18 | 98 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
++++P arikki++ad+dv +i+ +Pvl+ska elf+ +l ++ + ++ +t+ ++ +v+r ifdfl ++v +
Kalax.1005s0011.1.p 6 DTRFPAARIKKIMQADDDVGKIAMAVPVLVSKALELFLQDLCDHTYGITVQTGAKTVSSVHLKHCVQRYSIFDFLSEVVNK 86
5789************************************************************************99976 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MRKKLDTRFP AARIKKIMQA DDDVGKIAMA VPVLVSKALE LFLQDLCDHT YGITVQTGAK 60
TVSSVHLKHC VQRYSIFDFL SEVVNKVPDY SHSGTSGEVR TLSRRRKAAG DELTDSDEDS 120
KRSRLPEAGH AASGGRGRGR GRGRGRGRIG RVAEPDHNQQ DIEPESAFDA TQAADIKDRD 180
LPSDLTEEAD GLTNPAVGKF DLNAEIKENE STPALEMPDI LSEHPAIQQE KFPGWSLSEI 240
DRIGINPLQL ASTNNTLDDE DYDEEDG*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 137 | 146 | RGRGRGRGRG |
| 2 | 137 | 147 | RGRGRGRGRGR |
