PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0925s0006.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 305aa    MW: 34025.7 Da    PI: 6.752
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0925s0006.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.7e-10138185455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++ +L+ l+P +    +k + Ka +L + + YI+sLq
  Kalax.0925s0006.1.p 138 SHSLAERVRREKISERMRTLQALVPGS----DKVNGKALVLDHIISYIQSLQ 185
                          8*************************8....45599***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.43E-11132189No hitNo description
SuperFamilySSF474594.45E-16132200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.237134184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.9E-15134198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-7138185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-8140190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MAYFPNHVGF QVPSLVGQSN HSFPDPFYPF ESHYPAVLHG HPPQCHTPLY ASPPTDGLER  60
ETRPSGGRSA PTSAQSKGLG RTQKPEGDSK KQKDSAADRK QKAGERVHQQ ERSITSHENY  120
PATDYIHVRA RRGQATDSHS LAERVRREKI SERMRTLQAL VPGSDKVNGK ALVLDHIISY  180
IQSLQTQVEY LSMKLANLSP IHDDEMRQDQ TMKPASCGQR CGPTEPTVAW TASTMTETSC  240
YNHHLESSNL LQQVERLFSQ DGYADGILPW DDVVDQTQRL IDFNSSELGN ALRYIYQTAP  300
ADDI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021286178.12e-47transcription factor bHLH137
RefseqXP_021286179.12e-47transcription factor bHLH137
TrEMBLA0A0B0N1M13e-43A0A0B0N1M1_GOSAR; Transcription factor protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-44bHLH family protein