PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0836s0001.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 470aa    MW: 49939.7 Da    PI: 7.8576
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0836s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.42e-30234292259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+++r+aed +++++tYeg+Hnh+
  Kalax.0836s0001.1.p 234 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQIQRCAEDRTILVTTYEGNHNHP 292
                          7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.4E-33218294IPR003657WRKY domain
SuperFamilySSF1182902.48E-27226294IPR003657WRKY domain
PROSITE profilePS5081129.356228294IPR003657WRKY domain
SMARTSM007741.2E-35233293IPR003657WRKY domain
PfamPF031067.9E-26235292IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MANRGSDESD DGSYASDSKR AKIEVSSSVN SPIKDNEDGG RRTCDMHALS QLQTELGRMT  60
AENVKLKEML SHVSNNYEAL QLHMMSLMKQ QQSSLQPENG PEPKNGDHEK PAEKKHGVNA  120
GLTEPRRFLD IGRSGSGAET DEVLSHSSSE DGTQSGSPQA AGKRPRVDSK KDNKMVAVRE  180
DSPNSDTQVW TADKPGNNTN PNTAKASIDQ QSAEATMRKA RVSVRARSEA PMISDGCQWR  240
KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ IQRCAEDRTI LVTTYEGNHN HPLPPAAMSM  300
ASTTTAAAAM LLSGSMSSAD GLMNPNFLAR AMLPACSSSM ATISASAPFP TVTLDLTHTA  360
SPGPLQLQRP HPQAQFPGPI GPQILTSLPF ITNALPQIFT QALHNQSQFS GLQVSQDDSI  420
NAVTAAIAAD PSFTAAVAAT ISSIISGGGA NRSSNNNHNG SSITSIPPQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-21220296176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002263115.11e-154PREDICTED: probable WRKY transcription factor 31
SwissprotQ9XEC31e-122WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A438EDQ41e-152A0A438EDQ4_VITVI; WRKY transcription factor 6
TrEMBLF6H7H01e-152F6H7H0_VITVI; Uncharacterized protein
STRINGVIT_10s0116g01200.t011e-153(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.12e-93WRKY family protein