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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0733s0002.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
M-type_MADS |
| Protein Properties |
Length: 261aa MW: 29327.7 Da PI: 9.5733 |
| Description |
M-type_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0733s0002.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 50.3 | 3.1e-16 | 10 | 51 | 2 | 43 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
+i n+s r+ t+ kR+ g++KK +ELS+LC+++++ ii+s+
Kalax.0733s0002.1.p 10 FIANNSARKATYKKRKRGLIKKVNELSTLCGVDACAIIYSPY 51
799*************************************85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MRRQKFKLAF IANNSARKAT YKKRKRGLIK KVNELSTLCG VDACAIIYSP YETHPVVWPS 60
SAIGVQRVLS QFMRMPEMEQ SKTKVNQETF LRHRIVKTKE QLKKQVKDNR EEEMTEVMFQ 120
CLTGKDMMNL NMTDLNDITW LVDHCLREIN KKCEKLKNSG GDAGTANVVG ADPILEEIKP 180
LILNVNPNFS TGFNPSVAAD GMQSSTWLAG GFVNNNGASS SYNSNQLQGR PGIANDIMQG 240
QPQFNMGGMW LNCPNYFYNM *
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. Controls central cell differentiation during female gametophyte development. Required for the expression of DEMETER and DD46, but not for the expression of FIS2 (PubMed:16798889). Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction (Probable). {ECO:0000269|PubMed:16798889, ECO:0000305|PubMed:26462908}. |
