PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0705s0013.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 297aa    MW: 32985.1 Da    PI: 5.0005
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0705s0013.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.33.7e-05163207655
                          HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                          +++ r+RR++i ++ +eL +l+P         +++ ae+ +    Y+k+Lq
  Kalax.0705s0013.1.p 163 SIAARQRRRKIADKTQELGKLIPGgH------RMNTAEMFQSGSMYVKYLQ 207
                          6788*******************844......8888888888888888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.607157206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.97E-5160211No hitNo description
Gene3DG3DSA:4.10.280.103.0E-8161216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-8161218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.7E-4163212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MGLSYLSNYS TADYVLQQSL ELPQDLLELV SFQDEFTLAD TSIDPLFHPL PQKQPNFVSR  60
PQLLTTQYDT PYLHSCKRRK QIPSQQTDAH FSYDSMLASG APFFDGSGSA EALHLAQEFQ  120
ADGQSWVNDY VPFSPDVFAS ETTTYDGPGG HMCGGGGGLS AQSIAARQRR RKIADKTQEL  180
GKLIPGGHRM NTAEMFQSGS MYVKYLQAQI AMLTLTNSIQ EEAGSSECFE RERDIILQVL  240
AASPVVQEKL YSQETCLVPR KLIQSLSSDM RTRDTQEENF CRILATKIIK NIVTTN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.14e-21bHLH family protein