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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kalax.0702s0018.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
bHLH |
| Protein Properties |
Length: 411aa MW: 45775.8 Da PI: 4.9002 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0702s0018.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 35.6 | 1.6e-11 | 241 | 283 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
+ErrRR+r+N++++ Lr+++Pk + K++ +iL ++eY+k+L
Kalax.0702s0018.1.p 241 LAERRRRKRLNDRLSLLRSIVPKiS------KMDRTSILGDTIEYMKEL 283
58*********************66......****************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 411 aa
Download sequence Send
to blast |
MEISEEDFLQ ELLALRRSSQ TSSWDSTTST PTFSTHMTHN NNVVPNANNF ITTTNNTVWS 60
NNNSSFQITS SSSSPWDPPM DPQTFSTNHP PPFNQAFHNP TPRFPSSQHH PQLCSSAEHH 120
PHVMEEDETA SLFLVQHDGG GLYYNPFSGF EDHHYHQADV ASSLLDEDQS AMMMMMMMQS 180
DTQSLKIEPS AAATPSSDLL AVPSHVFNVG CGGSDFSERK SGGGGGKASK KVQGQPSKNL 240
LAERRRRKRL NDRLSLLRSI VPKISKMDRT SILGDTIEYM KELLERIQSL QDELDLDHHS 300
DDQVFLVDLF QDLKPNEVQI RNTPKFEVER RNPKDTRVEI CCSGKPGLLL STVNTMEALG 360
LEIEQCVISC FNDFAMHASC SEDVDTGNET DCEEIKQALF RNAGYGGQCL *
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 242 | 249 | ERRRRKRL |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
| Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Sharma N, et al.
NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis.
Development, 2016. 143(4): p. 682-90
[PMID:26758694] - Chen YS, et al.
Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
Plant Mol. Biol., 2017. 93(3): p. 299-311
[PMID:27866313] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470]
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