PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kalax.0670s0037.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 260aa MW: 26955 Da PI: 8.7142

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0670s0037.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.1	1e-05	140	185	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ah + r R +++ +++++L++l+ + +K + a++L +A+ YIk L Kalax.0670s0037.1.p 140 AHAAKPRPRKEKLGERIATLQQLVSPF-----GKTDTASVLHEAMSYIKFL 185 68888899999************98.....8**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.747	136	185	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.7E-12	138	198	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.9E-8	140	194	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.61E-5	148	190	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence Send to blast
MADDDRPEPG SFYQLLFSDP IVTLNTSKAG ADVTGPDYSE SFYGPNPPKM LCFGAYQKEE 60 EAICSEITAA ALRQMVSQSD SSSASSGNRH NSSSGKSSTA APKPNPNRKR TGSGRNPVGG 120 GASAEGKKNR SEKPAAAAPA HAAKPRPRKE KLGERIATLQ QLVSPFGKTD TASVLHEAMS 180 YIKFLHDQVQ VLSSPYLHSS PNQGGGDGGA VGLRSRGLCL VPVSCTAQVD GSTNGADFWA 240 PAAGINISSC VNLASSTKL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020239175.1	3e-53	transcription factor bHLH113 isoform X2
TrEMBL	A0A151U7S7	8e-52	A0A151U7S7_CAJCA; Transcription factor bHLH113 family

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19500.1	3e-37	bHLH family protein

Link Out ? help Back to Top
Phytozome	Kalax.0670s0037.1.p