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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Kalax.0666s0008.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
MYB |
| Protein Properties |
Length: 356aa MW: 39814.4 Da PI: 7.1626 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0666s0008.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 60.8 | 2.9e-19 | 36 | 80 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+g WT+eEde l +av+ + g++Wk+Ia+++g gRt+ qc +rwqk
Kalax.0666s0008.1.p 36 KGQWTAEEDETLRKAVEHYNGKSWKKIAECLG-GRTDVQCLHRWQK 80
799*****************************.************8 PP
|
| 2 | Myb_DNA-binding | 35.7 | 2e-11 | 80 | 120 | 7 | 48 |
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
Ed++++++v + G W+ Ia+++ gR +kqc++rw+ +l
Kalax.0666s0008.1.p 80 KEDKKIIELVGKNGATKWTNIAKHLT-GRIGKQCRERWYHHL 120
6************************9.************886 PP
|
| 3 | Myb_DNA-binding | 48.5 | 2e-15 | 126 | 168 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
+ +WT+eE++ l++a++ +G++ W+ + ++ gR+++ +k++w+
Kalax.0666s0008.1.p 126 KENWTQEEELTLIHAHRIYGNK-WAELTKFLP-GRSDNAIKNHWN 168
679*******************.*********.***********8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MATGREVAIS EGGSSDGSSK KRPANRVSGP SRRSTKGQWT AEEDETLRKA VEHYNGKSWK 60
KIAECLGGRT DVQCLHRWQK EDKKIIELVG KNGATKWTNI AKHLTGRIGK QCRERWYHHL 120
DPAIKKENWT QEEELTLIHA HRIYGNKWAE LTKFLPGRSD NAIKNHWNSS VKKKEESFMA 180
AGLLSNFPGV PDFGQQKFSV AFSSTQQTSG ENSHMRGGSE EDGVSECSQA STTLGCSQTS 240
NDLTIKVESL NPIQECHKNS LVDGNHSLSC NVGLDEIGDP MLSQSSHIQI SQANETSDLP 300
SNDPASDYLD IPSFEHLFYD EPNQFNVFMP WQNPQINPNV VLQWKFSQLL SMVRK*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (PubMed:21862669). Transcription activator involved in the regulation of cytokinesis, probably via the activation of several G2/M phase-specific genes transcription (e.g. KNOLLE) (PubMed:17287251, PubMed:21862669). Transcription repressor that regulates organ growth. Binds to the promoters of G2/M-specific genes and to E2F target genes to prevent their expression in post-mitotic cells and to restrict the time window of their expression in proliferating cells (PubMed:26069325). Required for the maintenance of diploidy (PubMed:21862669). {ECO:0000269|PubMed:17287251, ECO:0000269|PubMed:21862669, ECO:0000269|PubMed:26069325}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Constant levels during cell cycle. Activated by CYCB1. {ECO:0000269|PubMed:17287251}. |
