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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Kalax.0641s0004.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
Trihelix |
Protein Properties |
Length: 306aa MW: 34257.2 Da PI: 10.0428 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0641s0004.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 56.8 | 6e-18 | 23 | 109 | 1 | 83 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83
+Wt++e+laLi+ +r+++ +lrrg l+ ++W++v++++ r+ +s+ qC++k+e+l++ry+++k++ + s +++f+
Kalax.0641s0004.1.p 23 CWTHDETLALIDTYRDRWIALRRGYLRTADWDAVASAVaqrcRHVTPPKSSDQCRHKMEKLRQRYRAEKQRCVAFPGRFFSAWVFFK 109
8*********************************99997765666668999******************987665555556666665 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MSSASTPALP PPPTTTRKVP LPCWTHDETL ALIDTYRDRW IALRRGYLRT ADWDAVASAV 60 AQRCRHVTPP KSSDQCRHKM EKLRQRYRAE KQRCVAFPGR FFSAWVFFKV LSFLDDGGGS 120 AQTKKRAAEA KAVDPVRQLS SDDGRDDVDD DLHEQISLHK GSFIRPDKAG TAAGYAGRNL 180 VFDVDGGFNL SGGVSGKLHS SMKFVDSKPK ITPNHHQAVG DNGEGVDPLA EMATSIKLLG 240 DGFLKMEKMR MEMAVEFEKA RMEVELKRNE LIMESQRRIV DAFMRAAKRK KTKKELINGM 300 WIVYS*
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