PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0641s0004.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 306aa    MW: 34257.2 Da    PI: 10.0428
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0641s0004.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.86e-1823109183
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 
                          +Wt++e+laLi+ +r+++ +lrrg l+ ++W++v++++    r+    +s+ qC++k+e+l++ry+++k++      +  s +++f+
  Kalax.0641s0004.1.p  23 CWTHDETLALIDTYRDRWIALRRGYLRTADWDAVASAVaqrcRHVTPPKSSDQCRHKMEKLRQRYRAEKQRCVAFPGRFFSAWVFFK 109
                          8*********************************99997765666668999******************987665555556666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.2E-1822112No hitNo description
PROSITE profilePS500906.1562484IPR017877Myb-like domain
SMARTSM005955.5E-731119IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MSSASTPALP PPPTTTRKVP LPCWTHDETL ALIDTYRDRW IALRRGYLRT ADWDAVASAV  60
AQRCRHVTPP KSSDQCRHKM EKLRQRYRAE KQRCVAFPGR FFSAWVFFKV LSFLDDGGGS  120
AQTKKRAAEA KAVDPVRQLS SDDGRDDVDD DLHEQISLHK GSFIRPDKAG TAAGYAGRNL  180
VFDVDGGFNL SGGVSGKLHS SMKFVDSKPK ITPNHHQAVG DNGEGVDPLA EMATSIKLLG  240
DGFLKMEKMR MEMAVEFEKA RMEVELKRNE LIMESQRRIV DAFMRAAKRK KTKKELINGM  300
WIVYS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_009789567.16e-59(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-31Trihelix family protein