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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Kalax.0639s0011.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
GATA |
| Protein Properties |
Length: 280aa MW: 31744.7 Da PI: 7.4826 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0639s0011.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 55.6 | 7e-18 | 193 | 227 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
Cs+C + kTp+WR gp g+ktLCnaCG++y++ +l
Kalax.0639s0011.1.p 193 CSHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 227
*******************************9885 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MDEFFRVDDL LNFSNDDHVF TTDHSDHHHH HHLHQNQQLN SSSEHMVDYQ LKNYYDRNNN 60
LPRCNNSSFS SVSGPAAAAF GAQHFSYDFT DQLCVPNDDV AELEWLSNFV DDSFNDFNSN 120
ALTGTLMSQS HTSIPSAARS KRSRQRTWKA STSLISSSTA PQIDRSRTKR QETNSMSEFV 180
DDSSSSSGGV RRCSHCASEK TPQWRTGPMG PKTLCNACGV RYKSGRLVPE YRPAASPTFV 240
LTQHSNSHRK VMELRRQKEV TIKQQQGHVY RHSHDFEVC*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 140 | 145 | KRSRQR |
| 2 | 164 | 169 | RSRTKR |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}. |
