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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Kalax.0619s0017.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
DBB |
Protein Properties |
Length: 260aa MW: 27891.6 Da PI: 5.3495 |
Description |
DBB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0619s0017.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 19.5 | 2e-06 | 4 | 47 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
C+ +e+ e++ C ++ lC C + H H++vpl
Kalax.0619s0017.1.p 4 QCNVCESAEAKVLCCADEAALCWACDHKVHAAnklagkHQRVPL 47
7*****************************66899999999986 PP
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2 | zf-B_box | 27.9 | 4.8e-09 | 54 | 94 | 3 | 37 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
++kC+ ++e +fC +++ llC++C + +H + H
Kalax.0619s0017.1.p 54 MPKCDICQEAVGYFFCLEDRALLCRSCDVLIHTSnnmvslH 94
799*******9*********************765555555 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MKIQCNVCES AEAKVLCCAD EAALCWACDH KVHAANKLAG KHQRVPLSTT SSHMPKCDIC 60 QEAVGYFFCL EDRALLCRSC DVLIHTSNNM VSLHQRFLLT GVKVGLESAG VSQSSPAVKS 120 TSGQKTLQNE GHEAFKMKLT KSVPNSCSKV LATKVGGDAE TKLAEPPYSG GSSGGAISNW 180 MDDFFGLDDV DQNYAYMDEA SPKADSGKLG DSEQELEADR CLGKVSETAW MVPELSSPSR 240 TLGLQRNPID YVAFVPEMG*
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Functional Description ? help
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Source |
Description |
UniProt | Acts as positive regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation, independently and in concert with HY5 and BBX21 (PubMed:18540109, PubMed:18796637, PubMed:18182030, PubMed:21427283). Acts as a positive regulator of de-etiolation and influences chloroplast biogenesis and function through regulation of genes encoding chloroplast proteins (PubMed:18182030). Acts downstream of COP1 and plays an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). Regulates the expression of genes responsive to light hormone signals which may contribute to optimal seedling development (PubMed:21427283). {ECO:0000269|PubMed:18182030, ECO:0000269|PubMed:18540109, ECO:0000269|PubMed:18796637, ECO:0000269|PubMed:21070414, ECO:0000269|PubMed:21427283}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. {ECO:0000269|PubMed:18182030}. |