 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0599s0012.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
LBD |
| Protein Properties |
Length: 218aa MW: 23802.3 Da PI: 8.3347 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0599s0012.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 93.9 | 1.8e-29 | 4 | 104 | 1 | 96 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85
+C++C+vlr++C+++C++ p++ p++q++++ +++k++G++ +l+l++a+p + r+++++sl+yeA r+ +P+yG vg+++++++
Kalax.0599s0012.1.p 4 SCNGCRVLRKGCTDSCTIKPCLqwiktPEAQANATLFLAKFYGRAGLLNLIDAAPSHLRPAVFRSLLYEASGRILNPIYGPVGLLWSGSW 93
6***************************************************************************************** PP
DUF260 86 qleqlkaelal 96
ql+q++++ +l
Kalax.0599s0012.1.p 94 QLCQAAVDCVL 104
*****998876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCTDSCT IKPCLQWIKT PEAQANATLF LAKFYGRAGL LNLIDAAPSH 60
LRPAVFRSLL YEASGRILNP IYGPVGLLWS GSWQLCQAAV DCVLNGLPIT PINSEAAETP 120
HGPPLKTCDI RHVSKDLHKV KSRCRFKRSD SKQAVVNKID RKPEPEKNRS ASHDSTVSHP 180
AEPVWHFEEP SRDSESVLSG ETDAAVAGFD LELSLGI*
|
