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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Kalax.0502s0006.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
AP2 |
Protein Properties |
Length: 481aa MW: 53238.6 Da PI: 6.9119 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0502s0006.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 34 | 7.5e-11 | 210 | 258 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++ r++A+++d + + + g ++ +++Aa+a++ a++k++g
Kalax.0502s0006.1.p 210 SIYRGVTRHRWTMRYEAHLWD------NSSRREGGYDKEDKAARAYDLAALKYWG 258
57*******************......78888999***99*************98 PP
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2 | AP2 | 50.4 | 5.6e-16 | 301 | 352 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g
Kalax.0502s0006.1.p 301 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFPTEEEAAEAYDIAAIKFRG 352
57****************988532...5************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 481 aa
Download sequence Send
to blast |
MVTSADEPSR NRHSRQLHQT QQPEQHQNNH FISYAAASSD ASCPQYFFDN LYANGYSYSK 60 PQMSFQPTGA PDPLPWLSTS VSEPKLENLL DTSSMARYAE SQTETQNDSG LTVYEQGSGS 120 AGYFSQAAAQ LVQTNSGSEV VDSGSLNQVV TVASHHHHHQ LAELAVSNSH AQNNQNLSNR 180 ELMQVEERSV VAPQVDTSRK VSDTFGQRTS IYRGVTRHRW TMRYEAHLWD NSSRREGGYD 240 KEDKAARAYD LAALKYWGPT AVTNFPVSNY AKELEEMTSM TKQEFIASLR RKSSGFSRGA 300 SIYRGVTRHH QQGRWQARIG RVAGNKDLYL GTFPTEEEAA EAYDIAAIKF RGTNAVTNFE 360 MSRYDVAAIT KATLPIGGAA RRLKSPPESE VSLALDEPRL QNPTNNISFS LTQPLSAIPC 420 GVPFDTVSSL YQHNLYHQLQ SSHAAAMAVP EPRTSIGAPT GPINFLPNSG DFYAWPHQSY 480 *
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |