PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kalax.0498s0004.3.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

G2-like

Protein Properties

Length: 393aa MW: 43671.3 Da PI: 4.3639

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0498s0004.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	26.4	1.5e-08	1	20	36	55
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+v+gLt+e+++SHLQkYR+ Kalax.0498s0004.3.p 1 MNVPGLTRENIASHLQKYRI 20 9******************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.2E-8	1	24	IPR009057	Homeodomain-like
PROSITE profile	PS51294	9.089	1	23	IPR017930	Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000160	Biological Process	phosphorelay signal transduction system
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence Send to blast
MNVPGLTREN IASHLQKYRI FLKRVADVTE TPDGMGLSMG NRVYRSNLSY SQLYYGFQLE 60 HLEITDENLL RKMLKQELRA IRDPLYRGPS SRYQGPPTLS GTMRTPFKSI YSSFAFEPRD 120 YLNKQMPIIF GERLMGADSY RLTSLGSNEI MQQAAAPAPA PAPAQSSELV QFGMYTTGSR 180 LHTSGLVNDI EAQGGTIDMG TSYDMETENG QMMPQVTYCN AAMRQLENGP TQQVLLQPDV 240 HDSISDLSTS NLDISGFQGD FSGFLVNQLN GGDDTFNYLE EAGNDVVGYP YIGYGSNYSA 300 HDNQDKNQES APILNQQFGD GLSLIQTSHG DYPYFDDDFF PWSDHEPFQS QPGDQNANML 360 MVDERDASGC HEEVAGPLVN GSSKWSNHLR TE*

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence Send to blast

MNVPGLTREN IASHLQKYRI FLKRVADVTE TPDGMGLSMG NRVYRSNLSY SQLYYGFQLE  60
HLEITDENLL RKMLKQELRA IRDPLYRGPS SRYQGPPTLS GTMRTPFKSI YSSFAFEPRD  120
YLNKQMPIIF GERLMGADSY RLTSLGSNEI MQQAAAPAPA PAPAQSSELV QFGMYTTGSR  180
LHTSGLVNDI EAQGGTIDMG TSYDMETENG QMMPQVTYCN AAMRQLENGP TQQVLLQPDV  240
HDSISDLSTS NLDISGFQGD FSGFLVNQLN GGDDTFNYLE EAGNDVVGYP YIGYGSNYSA  300
HDNQDKNQES APILNQQFGD GLSLIQTSHG DYPYFDDDFF PWSDHEPFQS QPGDQNANML  360
MVDERDASGC HEEVAGPLVN GSSKWSNHLR TE*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-09	response regulator 2

Link Out ? help Back to Top
Phytozome	Kalax.0498s0004.3.p