PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Basic Information? help Back to Top

TF ID

Kalax.0498s0001.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 958aa MW: 105720 Da PI: 6.5975

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0498s0001.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.9	2.7e-08	219	270	22	72
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.t 72 +++k+++ + +ev++++ ++g+er +k kw+n+ ++++k+ ++e+++ + Kalax.0498s0001.1.p 219 GNNKSRAEKDREVAEFLNRHGVERDAKAAGTKWDNMLGDFRKVYQWERGGgR 270 35678899999************************************98733 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF56112	1.07E-13	807	942	IPR011009	Protein kinase-like domain
CDD	cd00180	3.74E-11	809	943	No hit	No description
Gene3D	G3DSA:1.10.510.10	6.4E-6	813	906	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 958 aa Download sequence Send to blast
MLIYVAPYLS MGDPKPPSSA SAVDTKLEQP ILPSSSSQPA SNIDALMNLQ QPPPPMGAVT 60 GDPLKYPPTT SFEHQLQLES PNVNPKRPRY GNSSGSQWKQ LLPSPTSAQT QPLMQQALLI 120 SASTPDASSP SSSTNPQLQV LQTQQPSAAA ASSTNTAASS PSLDAARRDE QQHQVHGHGQ 180 LRKGKYVSPV WKPVEMLMLA KGWHIQYMSA ARPGSDGRGN NKSRAEKDRE VAEFLNRHGV 240 ERDAKAAGTK WDNMLGDFRK VYQWERGGGR VEAGVTKSYF RLSPYERKNQ HGLPTSFDEE 300 VFEEMALFMG PRRSSSYSSL LQHTTVGSGK EDDDGAAAGP SLPVPPVPLS SSVPNTLRRM 360 GKMKMMWEEC VNLWAEEGET QSGRVNICSP STTASSLSSF LNADELVFFD DSMVATTLEA 420 FENGPLSGFS TDRFAPGQQL VILSNKNQLS AGSGSSRAYQ PPSVEPAVVT SSWPMGYQDP 480 SKYFLDSLKT SPATLPTLLE LSRYLQEPPP KELRFPLRPE VYRDLPQGKD LFFTTSSEPL 540 DCRMITYDIL GQVLRSKNLS ECTLTASGGR DSYIGLWDDC INMVVCKFCS LGIVFVRKPH 600 DALPCSTECL WPNVAGFVRG LCLWRGEERG EVRGEGGVMT HPSKSLVQKF LWGYVDLPYV 660 FGYYAVGCTV TFCALSRVSQ DKQKQVLCTD LLTIDLSSQA DRLRALIPCW RIATLLPLLA 720 DKCLNYATAT SMEAGGLPLF SDFERIELGM GDAIERTPNY ETRYFSSERR WASVKEIYGF 780 LDTRIPHSEY MAESSETQLS LLFKPRGCKV KPRSVDQLIE ALKNITKSLV ALHDLSFMHR 840 DISWDSVLRR VDSESDEEWF LCRFDAAAGA PQMSAFCSGV GEGGHAPEMK RGLHGVKVDV 900 WGIGWLIKTS GLLLPMQLTD LQSRCLEHNQ EMRPTAADCY HHLLQLSTAA AARDYSR*

Sequence ? help Back to Top

Protein Sequence Length: 958 aa Download sequence Send to blast

MLIYVAPYLS MGDPKPPSSA SAVDTKLEQP ILPSSSSQPA SNIDALMNLQ QPPPPMGAVT  60
GDPLKYPPTT SFEHQLQLES PNVNPKRPRY GNSSGSQWKQ LLPSPTSAQT QPLMQQALLI  120
SASTPDASSP SSSTNPQLQV LQTQQPSAAA ASSTNTAASS PSLDAARRDE QQHQVHGHGQ  180
LRKGKYVSPV WKPVEMLMLA KGWHIQYMSA ARPGSDGRGN NKSRAEKDRE VAEFLNRHGV  240
ERDAKAAGTK WDNMLGDFRK VYQWERGGGR VEAGVTKSYF RLSPYERKNQ HGLPTSFDEE  300
VFEEMALFMG PRRSSSYSSL LQHTTVGSGK EDDDGAAAGP SLPVPPVPLS SSVPNTLRRM  360
GKMKMMWEEC VNLWAEEGET QSGRVNICSP STTASSLSSF LNADELVFFD DSMVATTLEA  420
FENGPLSGFS TDRFAPGQQL VILSNKNQLS AGSGSSRAYQ PPSVEPAVVT SSWPMGYQDP  480
SKYFLDSLKT SPATLPTLLE LSRYLQEPPP KELRFPLRPE VYRDLPQGKD LFFTTSSEPL  540
DCRMITYDIL GQVLRSKNLS ECTLTASGGR DSYIGLWDDC INMVVCKFCS LGIVFVRKPH  600
DALPCSTECL WPNVAGFVRG LCLWRGEERG EVRGEGGVMT HPSKSLVQKF LWGYVDLPYV  660
FGYYAVGCTV TFCALSRVSQ DKQKQVLCTD LLTIDLSSQA DRLRALIPCW RIATLLPLLA  720
DKCLNYATAT SMEAGGLPLF SDFERIELGM GDAIERTPNY ETRYFSSERR WASVKEIYGF  780
LDTRIPHSEY MAESSETQLS LLFKPRGCKV KPRSVDQLIE ALKNITKSLV ALHDLSFMHR  840
DISWDSVLRR VDSESDEEWF LCRFDAAAGA PQMSAFCSGV GEGGHAPEMK RGLHGVKVDV  900
WGIGWLIKTS GLLLPMQLTD LQSRCLEHNQ EMRPTAADCY HHLLQLSTAA AARDYSR*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010272624.1	0.0	PREDICTED: uncharacterized protein LOC104608361
TrEMBL	A0A1U8B9B1	0.0	A0A1U8B9B1_NELNU; uncharacterized protein LOC104608361
STRING	XP_010272624.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-06	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Kalax.0498s0001.1.p