 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0475s0016.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
NF-YA |
| Protein Properties |
Length: 330aa MW: 35966.9 Da PI: 9.9098 |
| Description |
NF-YA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0475s0016.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | CBFB_NFYA | 103 | 2.7e-32 | 156 | 212 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
+ep+YVNaKQy++I++RRq Rak+e ekk+ +k+rkpylheSRh+hA+rR+Rg+gGrF
Kalax.0475s0016.1.p 156 EEPVYVNAKQYNGIMRRRQIRAKAELEKKV-IKNRKPYLHESRHQHAMRRARGCGGRF 212
69****************************.**************************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0016602 | Cellular Component | CCAAT-binding factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MMQMKAESGN QRAGYSQQSR WPGFENTDNS STGIRERSLR STSENVNLVT VGAIDSQFSS 60
SMNIAGNFNK VIPSGIALRP DGYSGQGNQT LTTSQSTMSE NPSESSQREL VDGSMVAASY 120
PYRDPSYGAI VPPYGQQALV YGVNQARMAL PLEMEEEPVY VNAKQYNGIM RRRQIRAKAE 180
LEKKVIKNRK PYLHESRHQH AMRRARGCGG RFLNTKKLNS ETSNSTSAAL DGTQHNGTLS 240
NQSILPRGLG NNLPASSSGY LYPLTEPQNS SFIPDTSMGH NIVSFGSSSS SSNIGGHDRS 300
SRYQTLPGDA QAYSSMQMTG PPRRTYPIT*
|
