PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0450s0040.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 391aa    MW: 43972.4 Da    PI: 4.5956
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0450s0040.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573100.21.8e-31177267497
               DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                          +rl+see ei lL+G++df++ktgk+ +dd+d+fye+vkk++++ +sksql++K+++LK+K++k+v+k+k+g+e    k+ d+k +els+
  Kalax.0450s0040.1.p 177 HRLFSEESEIELLKGMVDFADKTGKDFKDDLDGFYEYVKKELDVAFSKSQLLTKVKNLKRKYTKNVEKVKNGEE---LKPLDKKLYELSS 263
                          79******************************************************************999999...79*********** PP

               DUF573  94 kiWg 97 
                          kiWg
  Kalax.0450s0040.1.p 264 KIWG 267
                          ***8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.0E-25177267IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MAPKRPSPLE DPPSASSSDD EELAADEEVE EEEAAAEEEE EEEVAEEEEE EEVEEEEEEE  60
EEEEVADEET LKSSALPVAS SQPIVKKPAV DDVQNVHKKA SKPVEDVEMK KANLKSAKVL  120
YMKSIPKAGE KREVEEKEVV VVAVPAAVSK DGKKRKKSET LASEEKQQLE DSKKQGHRLF  180
SEESEIELLK GMVDFADKTG KDFKDDLDGF YEYVKKELDV AFSKSQLLTK VKNLKRKYTK  240
NVEKVKNGEE LKPLDKKLYE LSSKIWGGGG AVKSVINGGI DVASKSNGKR KRVKKEHIFK  300
NEEEMCDATR KEAEVDSLSL MELMKSSAGY VLNEELIKRG WNSISKDKRM KMNEQWESLL  360
LDEVKLNLRR LELARLHGQL VLDAFGASSH *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152156KKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.13e-20DNA-binding storekeeper protein-related transcriptional regulator