 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0448s0001.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
M-type_MADS |
| Protein Properties |
Length: 268aa MW: 30082.6 Da PI: 5.736 |
| Description |
M-type_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0448s0001.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 30.5 | 4.5e-10 | 11 | 50 | 3 | 42 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
i n + r tf kRr+ ++ K +E+SvL +++++ ii+s+
Kalax.0448s0001.1.p 11 ITNPTARRATFRKRRENLIRKLNEISVLAGTDACGIILSP 50
88999********************************997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MTRKKVQLAW ITNPTARRAT FRKRRENLIR KLNEISVLAG TDACGIILSP FEGDPPVFWP 60
PSINDILGRF FSLPELEQYK RMVSIESYMR DEISKLKETI QKERREVKEA EVSYIMNSIH 120
SHGMPIETLG GDETSELFWY FEELKKKCDL RLNQLDPNAS APQPLPESQM GMLNNTDLTD 180
PWLNRNCNNV TNNMQANYDY ATQNNNNNNN NGFGTFGGGN NIGMAGPDSS NPSYSQPPFE 240
SHHGFFSNSG MAGPSSNNAS YPQPPPP*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 2 | 24 | RKKVQLAWITNPTARRATFRKRR |
