PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Basic Information? help Back to Top

TF ID

Kalax.0430s0002.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 286aa MW: 32646 Da PI: 4.8624

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0430s0002.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	39.5	1.5e-12	92	176	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt + + L++a ++ + +r++l+ W++v++k+ +e ++er+ +qC+++++ +k+ykk+k+ + + ++ss+ yf++++ Kalax.0430s0002.1.p 92 WTVHGTFILLDAWGDRFLQRGRKSLRSEEWKKVAEKVsKESKIERTDTQCRNRLDTPKKKYKKEKAEFGV-SGGQSSKLIYFKKMD 176 99999******************************8999*********************9997.5888899****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	3.0E-18	91	177	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence Send to blast
MYASDEYVYA RDEYVDACDE YMYGSDEYVY GSDEYVYAND EYVYTNDEYV YASRPITKRR 60 LDFASEFRIS PSFSPESSDS FFFSCEKKVA DWTVHGTFIL LDAWGDRFLQ RGRKSLRSEE 120 WKKVAEKVSK ESKIERTDTQ CRNRLDTPKK KYKKEKAEFG VSGGQSSKLI YFKKMDVLMS 180 PSPKQPGLSC GVDSRECVFS NPRVYLNRAN GLDEVRDSPG HSDSTEDDTY DSDGLPPRRK 240 RPGRANNPNN KNDCSSMTLL QMVEIAKIWQ GGDEDNSASA DNISS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021829161.1	8e-72	trihelix transcription factor ASIL2-like
TrEMBL	A0A2R6PSZ1	3e-72	A0A2R6PSZ1_ACTCH; Trihelix transcription factor
STRING	EMJ18458	1e-72	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	4e-29	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Kalax.0430s0002.1.p