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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Kalax.0396s0026.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
bHLH |
Protein Properties |
Length: 489aa MW: 55202.1 Da PI: 4.6857 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0396s0026.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 37.8 | 3.5e-12 | 252 | 295 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
e+ErrRR+++N+++ +Lr+l+P + Kl+Ka+iL A+ Y+k+L
Kalax.0396s0026.1.p 252 LEAERRRRKKLNERLYNLRSLVPIiS------KLDKASILVDAITYVKDL 295
589*********************66......****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 489 aa
Download sequence Send
to blast |
MRSFMERLRD LVGNNGWDYC VVWRLNEDQR VIEWLDCCCA SAAVNSLDKQ DELMFPVSSV 60 FCCRDAVFQH QRTQCCDFLS QLPSSVSLDD SGIYAQVLFS NQPRWLNFFN NPDQENPSGE 120 IHATRVLIPV PGALVELFAA KQVFEDQQVV DFVMSHCSNQ LELQAFFNSG LPSSTHGAHD 180 NGYGMEAMMT HDGSDLPREP SGGHSKDLNE KDSVKPEMGR SDSISDCSDQ IDDEDDAGCR 240 KRNGKRPQAK NLEAERRRRK KLNERLYNLR SLVPIISKLD KASILVDAIT YVKDLKKQEK 300 ELQDELEELS NDEDVRNNGT ANIEAPTDFM SYPDDLNAPN NLLFGAIDSM QPCTLITRTH 360 EAATEDDKVQ QMEPQVEVTL INANKFFIKV FCEHKPGRLV RLLEFLNSLG LEVTNVNVTS 420 CKKLVSNLFE VELKRDSEVV ADDLKNSLLE LTRIPLSSGW MHDQIPSKPG NGVDIYQCHH 480 GIPYHLQN*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 2e-12 | 244 | 316 | 2 | 75 | Transcription factor MYC2 |
5gnj_B | 2e-12 | 244 | 316 | 2 | 75 | Transcription factor MYC2 |
5gnj_E | 2e-12 | 244 | 316 | 2 | 75 | Transcription factor MYC2 |
5gnj_F | 2e-12 | 244 | 316 | 2 | 75 | Transcription factor MYC2 |
5gnj_G | 2e-12 | 244 | 316 | 2 | 75 | Transcription factor MYC2 |
5gnj_I | 2e-12 | 244 | 316 | 2 | 75 | Transcription factor MYC2 |
5gnj_M | 2e-12 | 244 | 316 | 2 | 75 | Transcription factor MYC2 |
5gnj_N | 2e-12 | 244 | 316 | 2 | 75 | Transcription factor MYC2 |
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 239 | 260 | RKRNGKRPQAKNLEAERRRRKK |
2 | 254 | 261 | ERRRRKKL |