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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Kalax.0364s0018.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
Trihelix |
Protein Properties |
Length: 304aa MW: 34950.3 Da PI: 9.2645 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0364s0018.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 82.9 | 4.3e-26 | 41 | 124 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+ qe+++ + +r e+++++ ++k++k lWe +s kmre+gf+rs+ qCk+kw+nl +ryk ++++e ++ s ++++p++++++
Kalax.0364s0018.1.p 41 QWSMQETKEFLMIRAELDRTFMETKRNKLLWEVISTKMREKGFNRSADQCKCKWKNLVTRYKGCETMEPDGMS--RQQFPFYSDMQ 124
7*********************************************************************954..556******96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MEGRHHHHQH HHLAPQLAGT AGPSATTSME AAASGDSRFP QWSMQETKEF LMIRAELDRT 60 FMETKRNKLL WEVISTKMRE KGFNRSADQC KCKWKNLVTR YKGCETMEPD GMSRQQFPFY 120 SDMQGIFTAR LERVLWSEAQ GGAAAAGSSG LARKRALSSS DEDEESDEGD QRTTAMTPTS 180 SHVRKKKKGK VANARSGGGG ELREILGEFM KQQMQMEAQW REAFEAREAE RRAREVEWIR 240 NMEALESERL SMERRWRERQ EQRMMREEAR AEKRDALITC LLNKLRREES SSASHHHQLP 300 PPP*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may play a role in the induction of CAM4 in response to pathogen and salt. {ECO:0000269|PubMed:15310827}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salt and infection with the bacterial pathogen P.syringae pv tomato. {ECO:0000269|PubMed:15310827}. |