PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0360s0054.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 129aa MW: 14952.2 Da PI: 10.4764 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 40.2 | 5.7e-13 | 6 | 33 | 29 | 56 |
HHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 29 ereeLAkklgLterqVkvWFqNrRakek 56 e+e LA++l+L++rqV vWFqNrRa+ k Kalax.0360s0054.1.p 6 EKETLADQLKLKTRQVEVWFQNRRARSK 33 789***********************99 PP | |||||||
2 | HD-ZIP_I/II | 73.7 | 3.4e-24 | 6 | 67 | 28 | 89 |
HD-ZIP_I/II 28 rKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +K++la +L+l++rqv+vWFqnrRAR k+kq+E++ + L++++++l+++n+rL+++ +eLr+ Kalax.0360s0054.1.p 6 EKETLADQLKLKTRQVEVWFQNRRARSKSKQMEVELHLLRQRCENLSDQNQRLKDQIRELRA 67 799*********************************************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 12.455 | 1 | 35 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 5.2E-11 | 5 | 38 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.55E-10 | 5 | 44 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 4.24E-8 | 5 | 36 | No hit | No description |
Pfam | PF00046 | 2.5E-10 | 6 | 33 | IPR001356 | Homeobox domain |
PROSITE pattern | PS00027 | 0 | 10 | 33 | IPR017970 | Homeobox, conserved site |
SMART | SM00340 | 4.0E-6 | 35 | 78 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence Send to blast |
MTFLSEKETL ADQLKLKTRQ VEVWFQNRRA RSKSKQMEVE LHLLRQRCEN LSDQNQRLKD 60 QIRELRATNL IGPRPSPFEA KLVKLAPSPI CPSCNKSFTV EDSPRSSDPE LSGFKSHRIF 120 YTIRLHSL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 35 | RRARSKSKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017410384.1 | 1e-25 | PREDICTED: homeobox-leucine zipper protein HAT3-like isoform X1 | ||||
Refseq | XP_017410385.1 | 1e-25 | PREDICTED: homeobox-leucine zipper protein HAT3-like isoform X2 | ||||
Refseq | XP_017410386.1 | 1e-25 | PREDICTED: homeobox-leucine zipper protein HAT3-like isoform X3 | ||||
Refseq | XP_019433020.1 | 1e-25 | PREDICTED: homeobox-leucine zipper protein HAT22-like | ||||
TrEMBL | A0A0L9TG71 | 3e-24 | A0A0L9TG71_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3R8K6 | 3e-24 | A0A0S3R8K6_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A1J7FP84 | 3e-24 | A0A1J7FP84_LUPAN; Uncharacterized protein | ||||
STRING | GLYMA13G00310.1 | 6e-24 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 4e-21 | homeobox protein 2 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0360s0054.1.p |