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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kalax.0355s0005.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 338aa MW: 38204.7 Da PI: 5.65 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0355s0005.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 163.6 | 7.1e-51 | 8 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lp+GfrF+Ptdee+v +yL +k+ ++++++ +i ++d +k+ePwdLpk ++ +e+e y++++rd+ky+tg r+nratk+gyWkatgkdk
Kalax.0355s0005.1.p 8 LPRGFRFRPTDEEIVYHYLIPKAMNSSFST-AAIGQADFNKCEPWDLPKIAYMGETERYYYCQRDRKYPTGLRTNRATKAGYWKATGKDK 96
799************************999.78***************88888999********************************** PP
NAM 91 evlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
e+++ ++elvg+kktLvfy+grap+gekt+Wvmheyrl
Kalax.0355s0005.1.p 97 EIYKGtginRRELVGMKKTLVFYTGRAPRGEKTNWVMHEYRL 138
***9888877888***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MEEDMMGLPR GFRFRPTDEE IVYHYLIPKA MNSSFSTAAI GQADFNKCEP WDLPKIAYMG 60
ETERYYYCQR DRKYPTGLRT NRATKAGYWK ATGKDKEIYK GTGINRRELV GMKKTLVFYT 120
GRAPRGEKTN WVMHEYRLQP HFSSSSMIPK NDGWVVSRVF HKNSNSSGGT GSGMQEKTYS 180
DVANDSFSQM QRADSFSTDQ LIREDFESLP PLVDLSALPP PPPPPNTLSQ IIQGLKPAMI 240
SHDSSLQQSQ PEAIRWLPTY ANDDDQLIYS DLPAYYSPFG YEEPKDKNNV VGAAMENEGK 300
PLPQCATSAE ISSHDYEHHN EMTSLGSISD LSILWDF*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-45 | 6 | 166 | 15 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-45 | 6 | 166 | 15 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-45 | 6 | 166 | 15 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-45 | 6 | 166 | 15 | 169 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 8e-45 | 6 | 166 | 18 | 172 | NAC domain-containing protein 19 |
| 3swm_B | 8e-45 | 6 | 166 | 18 | 172 | NAC domain-containing protein 19 |
| 3swm_C | 8e-45 | 6 | 166 | 18 | 172 | NAC domain-containing protein 19 |
| 3swm_D | 8e-45 | 6 | 166 | 18 | 172 | NAC domain-containing protein 19 |
| 3swp_A | 8e-45 | 6 | 166 | 18 | 172 | NAC domain-containing protein 19 |
| 3swp_B | 8e-45 | 6 | 166 | 18 | 172 | NAC domain-containing protein 19 |
| 3swp_C | 8e-45 | 6 | 166 | 18 | 172 | NAC domain-containing protein 19 |
| 3swp_D | 8e-45 | 6 | 166 | 18 | 172 | NAC domain-containing protein 19 |
| 4dul_A | 8e-45 | 6 | 166 | 15 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 8e-45 | 6 | 166 | 15 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that acts as positive regulator of leaf senescence. Activates NYC1, SGR1, SGR2 and PAO, which are genes involved in chlorophyll catabolic processes. Activates senescence-associated genes, such as RNS1, SAG12 and SAG13. {ECO:0000269|PubMed:27021284}. |
