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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Kalax.0325s0001.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
bHLH |
Protein Properties |
Length: 597aa MW: 65928.1 Da PI: 6.893 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0325s0001.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.3 | 1.2e-12 | 428 | 474 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq
Kalax.0325s0001.1.p 428 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITELQ 474
799***********************66......*****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 597 aa
Download sequence Send
to blast |
MRMGWNEEEK ALIASVLGNR AIDYLLASLG SNDGGQLMAL GTDENLNNKL SNLVERPDSS 60 EFTWNYAIFW QLSRSRNGDM VLGWGDGCCR EAKDGEELRV ATSPGHTLEE EEEEDDESRQ 120 RMRKRVLHNL HAVLGGFEED NFVLHLDRVT DTEMFFLASM YFSFPQGQGG PGMCLKLGKH 180 FWLPDLPKSS RDYCVRSFLA TTAGFRTIVL VPTDMGVIEL GSVRSVPESL EWVQSLKSLF 240 SLRSQVRTSR LSNENILSLK SEYGVKAGGN TMIFGQDLNS CRHGLFREKL AIRKNDRPWT 300 ACNSQGAIQL ANIQNGSTGW AQLCSNRQVS SPGMFTSAAA AVAANNLHEL VNGAQQDFRL 360 NNYQSKKQIQ IDFSAAPRKP VVNQPVSAES EHSDVEASCK EAGSSQAADR RPKKRGRKPA 420 NGRDEPLNHV EAERQRREKL NQRFYALRAV VPNISKMDKA SLLGDAITYI TELQAKLKDL 480 ESERIKLGNA SVTGNTLTLG SNSTAEVQNR VVDIESSQDE VVVKVTCPLE AHPANRVIQA 540 FKDAQINVVD SKLAAIDNTV FHTFVIKSSG CNQITTERVT AALARDSSQL ELSSRG*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 7e-30 | 422 | 489 | 2 | 69 | Transcription factor MYC2 |
5gnj_B | 7e-30 | 422 | 489 | 2 | 69 | Transcription factor MYC2 |
5gnj_E | 7e-30 | 422 | 489 | 2 | 69 | Transcription factor MYC2 |
5gnj_F | 7e-30 | 422 | 489 | 2 | 69 | Transcription factor MYC2 |
5gnj_G | 7e-30 | 422 | 489 | 2 | 69 | Transcription factor MYC2 |
5gnj_I | 7e-30 | 422 | 489 | 2 | 69 | Transcription factor MYC2 |
5gnj_M | 7e-30 | 422 | 489 | 2 | 69 | Transcription factor MYC2 |
5gnj_N | 7e-30 | 422 | 489 | 2 | 69 | Transcription factor MYC2 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 409 | 417 | RRPKKRGRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}. |