 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0315s0031.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 337aa MW: 37357.7 Da PI: 4.4638 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0315s0031.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.7 | 2.3e-19 | 96 | 148 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++++ +q++ Le+ Fe ++++ +++ +LAk+lgL+ rqV +WFqNrRa++k
Kalax.0315s0031.1.p 96 KRRLSVDQVQFLERSFEAENKLEPDRKIQLAKELGLQPRQVAIWFQNRRARWK 148
568999**********************************************9 PP
|
| 2 | HD-ZIP_I/II | 130.3 | 7.5e-42 | 95 | 185 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
kkrrls +qv++LE+sFe+e+kLep+rK +la+eLglqprqva+WFqnrRAR+ktkq+E+dy+aL+++y++lk++ e+L +e+e+L++e+
Kalax.0315s0031.1.p 95 KKRRLSVDQVQFLERSFEAENKLEPDRKIQLAKELGLQPRQVAIWFQNRRARWKTKQMERDYDALQASYNSLKSSCEALVEENENLKAEV 184
9**************************************************************************************998 PP
HD-ZIP_I/II 92 k 92
Kalax.0315s0031.1.p 185 V 185
6 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MAAGGSRVFR SGNLTSCSES MAPVSNPPAI ASSSRHSDAL FLPGSSRFPG SSSAMVSFED 60
VNGSMGRNTR SFFTAFDQDD NGDEDYEEYL NQAGKKRRLS VDQVQFLERS FEAENKLEPD 120
RKIQLAKELG LQPRQVAIWF QNRRARWKTK QMERDYDALQ ASYNSLKSSC EALVEENENL 180
KAEVVALSEK LASKENPLQN AEHSEASKQS AAVPDNPISN SASEEEDSKF PLVEQKLLDD 240
FTSAKSDIFQ SDSPRYADGV YSPHLEHVDS SYVFEPDNNS DLSQDEDDSL PKAYLPSSSY 300
MLPPLKHGDY PDLSATSSSN FGSAHGDHQP FWSWSF*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 142 | 150 | RRARWKTKQ |
