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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kalax.0292s0047.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
MYB |
| Protein Properties |
Length: 351aa MW: 39188.5 Da PI: 7.0005 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0292s0047.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 58.7 | 1.3e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEde+lvd +++ G g+W++ ++ g++R++k+c++rw +yl
Kalax.0292s0047.1.p 15 KGPWTPEEDEKLVDFINKNGHGSWRSLPKLAGLNRCGKSCRLRWTNYL 62
79********************************************97 PP
|
| 2 | Myb_DNA-binding | 52.7 | 9.9e-17 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++++E+ ++++++ lG++ W++Ia +++ gRt++++k++w+++l
Kalax.0292s0047.1.p 68 RGKFSEDEERIIIHLHSVLGNK-WSRIATHLP-GRTDNEIKNFWNTHL 113
89********************.*********.************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MGRSPLSFED DGLKKGPWTP EEDEKLVDFI NKNGHGSWRS LPKLAGLNRC GKSCRLRWTN 60
YLRPDIKRGK FSEDEERIII HLHSVLGNKW SRIATHLPGR TDNEIKNFWN THLRRKLLQM 120
GIDPTTHKPR TDYNNLLMNL TQLLATSNIA NLMSNNNNPW ENLSALRLQA DAAAQLAKAQ 180
LFQNLIQAMN ITNTQNTLGF GTSQDHTSLQ GLLHSNSGSH DTNNNNALSS KHQFVNPSET 240
PLTHQVCDEL QGVANSRAVS YQGGGLNPES GLSTNDNSPY YQVDLPALVT VSKDCSTSAN 300
QIETAKDHNL SSSYTFSSFS PTSSSFQSWA ELFDEEAIHN YSFIKDFLQQ *
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that acts as negative regulator of lateral root (LR) development. Required for normal auxin responses during LR development. May be part of a negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place. {ECO:0000269|PubMed:24902892}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA), auxin and gravity in roots. {ECO:0000269|PubMed:24902892}. |
