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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Kalax.0286s0039.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
Trihelix |
Protein Properties |
Length: 531aa MW: 59853.9 Da PI: 7.1532 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0286s0039.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 86.5 | 3.3e-27 | 130 | 215 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+++e++ L+++r++++++++++ k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+ke ++++ + +++++f+qlea
Kalax.0286s0039.1.p 130 RWPREETMSLLQIRSRLHSNFKQATHKGPLWDEVSRIMyEEHGYQRSGKKCREKFENLYKYYKKTKEAKSGK--HDGKNYRFFRQLEA 215
8*************************************99****************************9995..67778*******85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 531 aa
Download sequence Send
to blast |
MEQVDEQQQQ AAAEVDVVNH HQNNSINNHY AGLIQTSKPL TTSMSYFQPP QPTNLDHPIY 60 SALPHRFFFN SNTHNNQNQQ QQRPYHEVDG IGTTSTYLAA GGLLLESCSA ASEATAAAFN 120 YGSSNSCSSR WPREETMSLL QIRSRLHSNF KQATHKGPLW DEVSRIMYEE HGYQRSGKKC 180 REKFENLYKY YKKTKEAKSG KHDGKNYRFF RQLEALYGDQ NEVIGTSMTD HLAAAQPNTI 240 SSQAHFPPNP AADSGGINNN QIMMMRSSGH LFGDSDPQVI SPNNHHHNSM KLPCDQSCLS 300 LSNHNSSLFT SSSSEDNKRG HNKKYKLKVK IKEFIDTQMN SLMEQQQLCM EKVMETIEKK 360 ETERALREEE WRQEAEERLE KEHKYWESER AWMKARDAAL MVTIQKLTAA RSAASSSSSV 420 RDVARVTSLA SHMQQIPFSS SSGNLINKQP AEIVTVRNPQ ALYSNQESQD GWFMAAANHH 480 HHHDSNNNNG FRFVMSDGNN GGSGGSVIWD GSSSFGLKLN NGDDDHHHQN *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}. |