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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0277s0054.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HSF |
| Protein Properties |
Length: 360aa MW: 38904.7 Da PI: 6.305 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0277s0054.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 114 | 1e-35 | 39 | 129 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91
Fl+k+y++++d +++++isw+e+g++fvv+++ efa++vLpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k
Kalax.0277s0054.2.p 39 FLTKTYQLVDDISIDSIISWNEDGTAFVVWNPAEFARDVLPKYFKHNNFSSFVRQLNTYGFRKVMPDR---------WEFSNDCFRRGDK 119
9*****************************************************************99.........************* PP
XXXXXXXXXX CS
HSF_DNA-bind 92 ellekikrkk 101
+ll++i r+k
Kalax.0277s0054.2.p 120 RLLCDIVRRK 129
*******997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MAHQPPPLPL GEQIVAVDLP PPPPPPTVPD AQRFIPTPFL TKTYQLVDDI SIDSIISWNE 60
DGTAFVVWNP AEFARDVLPK YFKHNNFSSF VRQLNTYGFR KVMPDRWEFS NDCFRRGDKR 120
LLCDIVRRKL MSGVSGSSSA LTVSAQPVLM DPSTSQSGEG QVFSSNSTPT SAAPMATVFL 180
DHQNNSGNNI GSSSSNNCGN AARAHLIDEN DRLKKENTQL WKELSQMKSM CTNIYSMMSN 240
YNPGSGPVPG LGHGLGPPMH AAAGCGSSNN SSQAESVMNP AMNPVAIDLM SSRRLLAAVA 300
EIQAATPAAQ PAAEENLCMH SRLFGFQLGS KRARGDGSSD PMDQEDLLQL QQPGPSFNH*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5d5u_B | 1e-24 | 39 | 128 | 29 | 129 | Heat shock factor protein 1 |
| 5d5v_B | 1e-24 | 39 | 128 | 29 | 129 | Heat shock factor protein 1 |
| 5d5v_D | 1e-24 | 39 | 128 | 29 | 129 | Heat shock factor protein 1 |
| 5hdg_A | 9e-25 | 39 | 128 | 10 | 110 | Heat shock factor protein 1 |
| 5hdn_A | 9e-25 | 39 | 128 | 10 | 110 | Heat shock factor protein 1 |
| 5hdn_B | 9e-25 | 39 | 128 | 10 | 110 | Heat shock factor protein 1 |
| 5hdn_C | 9e-25 | 39 | 128 | 10 | 110 | Heat shock factor protein 1 |
| 5hdn_D | 9e-25 | 39 | 128 | 10 | 110 | Heat shock factor protein 1 |
