PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kalax.0265s0021.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 329aa MW: 36658.5 Da PI: 7.5381

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0265s0021.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.6	6e-15	156	202	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++N++f+ L + +P + kK++Ka++L++A++Y+k+Lq Kalax.0265s0021.1.p 156 DHIMAERNRREKLNQRFNALSSAIPGL-----KKMDKATVLQEATKYVKQLQ 202 699**********************.....9****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	16.132	152	201	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.6E-12	156	202	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.1E-18	156	215	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.58E-14	157	206	No hit	No description
SuperFamily	SSF47459	1.22E-17	157	216	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.3E-15	158	207	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence Send to blast
EMDQHQNLSN LWMVNSQADM SGAIPMEAAF DDLQHSNSLY AYQLPIVETA MNDFQINNNP 60 MEQLTTNIRG SYDVSTTSDS DAADAAIYLY SSVNPTGVAW PKQENHCYNN NCPSQFTNGD 120 YPVWNENYSW TPGREVKGKA TNAIGATTSR SSEAQDHIMA ERNRREKLNQ RFNALSSAIP 180 GLKKMDKATV LQEATKYVKQ LQERIKTLEK QTKSITMMES AVFVKKSLLV INDINKSGFS 240 NETSFNEKTL SDESLPVIKV RFCEKKVLIR VHCDRKKGAS AEKILGEIAK LHLTVVNSNV 300 LAFGSSALDV TVLAKPKDLL RVIYALFS*

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269\|PubMed:12679534}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Swissprot	Q9T072	4e-46	BH025_ARATH; Transcription factor bHLH25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	3e-48	bHLH family protein

Link Out ? help Back to Top
Phytozome	Kalax.0265s0021.1.p