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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0262s0045.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
bHLH |
| Protein Properties |
Length: 352aa MW: 39237.4 Da PI: 4.4703 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0262s0045.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 34.4 | 3.9e-11 | 186 | 229 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N++++ Lr+++P + K++ +iL +++Y+k+L
Kalax.0262s0045.1.p 186 LMAERRRRKRLNDRLSMLRSIVPRiS------KMDRTSILADTIDYMKEL 229
589*********************66......****************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MELSQPFLLE EWLAMKRENC STYQTGVEMN EFYTDGWSCD FIDEPQALAA STDAAMGTAA 60
GFALPQMEPY FDVPFSEVYN TLDACFDAPA PAAADQFNLA YEINNGATLL PPIHDQYTSM 120
MDEDFTFFSN DCVELMKEDK HASGCKVEMV QSPNENLGSS TSKMSGGGRE RRNGVKKAGG 180
QPSKNLMAER RRRKRLNDRL SMLRSIVPRI SKMDRTSILA DTIDYMKELL EKVSKLEEEE 240
EEHTEAGPIN KLKELKSSEG QAKNSPKFDV KMGEKDTRID ICCTTRPGLL LTTVNTLEAL 300
GLEIQQCVIS CFNDFSMQAA CSQVSEEQMA LTTEVIKQAL FRNAGYEGRC I*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 188 | 195 | ERRRRKRL |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
| Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Sharma N, et al.
NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis.
Development, 2016. 143(4): p. 682-90
[PMID:26758694] - Chen YS, et al.
Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
Plant Mol. Biol., 2017. 93(3): p. 299-311
[PMID:27866313] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470]
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