 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0262s0033.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
AP2 |
| Protein Properties |
Length: 366aa MW: 40469 Da PI: 8.8606 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0262s0033.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 33.8 | 8.4e-11 | 87 | 143 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++ r++A+++d s++ rk + g ++ +++Aa+a++ a++k++g
Kalax.0262s0033.1.p 87 SIYRGVTRHRWTMRYEAHLWDNSSRRegqARKGRQ-GGYDKEDKAARAYDLAALKYWG 143
57*******************77744454336655.7799999*************98 PP
|
| 2 | AP2 | 50.9 | 3.8e-16 | 186 | 237 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g
Kalax.0262s0033.1.p 186 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFPTEEEAAEAYDIAAIKFRG 237
57****************988532...5************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 366 aa
Download sequence Send
to blast |
YFSQAAAQLV QTNSGSEVVD SGSLNQVVTV ASHHHQLAEL GVSNCDNSAQ NHQNLNNREL 60
VQVEERSVIA QVDTGRKVSD TFGQRTSIYR GVTRHRWTMR YEAHLWDNSS RREGQARKGR 120
QGGYDKEDKA ARAYDLAALK YWGPTAVTNF PVSNYAKELE EMTSMTKQEF IASLRRKSSG 180
FSRGASIYRG VTRHHQQGRW QARIGRVAGN KDLYLGTFPT EEEAAEAYDI AAIKFRGTNA 240
VTNFEMSRYD VAAITKATLP IGGAVRSLKS PPESEVSLAL NEPRLQNPTN NISFSLTQPL 300
SAIPCGVPFD AVPSLYQHNL YHQLQSSHAA VMAVPEPQTS IGTPTGPINF LPYSGDFYAW 360
PHQSY*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
