 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kalax.0249s0024.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
LBD |
| Protein Properties |
Length: 233aa MW: 24926.1 Da PI: 8.3321 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0249s0024.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 99.7 | 2.9e-31 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85
+C++C+vlr++C++ Cvl+p++ p++q +++ +v+k+FG++ ++++++++pe++r+++++sl++eA+ r+ +Pv+Gavg++ ++++
Kalax.0249s0024.1.p 2 SCNGCRVLRKGCSETCVLRPCLqwidsPESQGHATVFVAKFFGRAGLMSFISNVPESQRPALFQSLLFEACGRTVNPVNGAVGLLGTGNW 91
6***************************************************************************************** PP
DUF260 86 qleqlkaelall 97
q++q+++e++l+
Kalax.0249s0024.1.p 92 QVCQAAVETVLR 103
******999876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSETCVLR PCLQWIDSPE SQGHATVFVA KFFGRAGLMS FISNVPESQR 60
PALFQSLLFE ACGRTVNPVN GAVGLLGTGN WQVCQAAVET VLRGGTLRPV SADLLVSGRG 120
APPQPQEADE CSEEATCSNM WSASASRKRA TKKSNVTGGG GGMRVSPPGS AELGLSLSPG 180
YEQRSEKRRR PGTPSEESGT SFERGLNGHF EVEGQFEQQR RSSEARLLEL FR*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KR076542 | 2e-99 | KR076542.1 Boehmeria nivea lateral organ boundaries domain protein (LBD16) mRNA, complete cds. |
