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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kalax.0246s0011.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
DBB |
| Protein Properties |
Length: 304aa MW: 33042.9 Da PI: 7.458 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0246s0011.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 21.3 | 5.6e-07 | 4 | 43 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
C+ +++ e++ fC ++ lC +C H+ H+
Kalax.0246s0011.1.p 4 QCDVCSSREASVFCSADEAALCSSCDHRVHHAnklaskHQ 43
7******99******************9964446666676 PP
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| 2 | zf-B_box | 31.5 | 3.5e-10 | 54 | 92 | 2 | 38 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38
++++C+ ++ek++ lfC++++ lC+dC +++H+ Ht
Kalax.0246s0011.1.p 54 DAPVCDICQEKRAFLFCQQDRAVLCKDCDFSIHSAneHT 92
6799*****************************657775 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MKIQCDVCSS REASVFCSAD EAALCSSCDH RVHHANKLAS KHQRFSLVNP DKNDAPVCDI 60
CQEKRAFLFC QQDRAVLCKD CDFSIHSANE HTQKHSRFLL TGVKLSAYVS SAAAAKTTAS 120
ETSLTVSCDL VPDFKSQPLN KKSNSVSNQT LNPQSLAAER IASPSSSGGG ESVVLRNDVG 180
ISEYLIEMLP GWHVEDFLDS TSALYGFSKG DDSMPTFNNT NFQTSDLSSV PLQNAAIWVP 240
QAPQPPKQAS HFAASHLTGN ISFKDATNTK ANRRLADEGF AVPQISPQFT NTSSKRSRPV 300
RYY*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that acts as positive regulator of seedling photomorphogenesis (PubMed:17965270). Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). {ECO:0000269|PubMed:17965270, ECO:0000269|PubMed:21070414}. |
| Publications
? help Back to Top |
- Xu D, et al.
BBX21, an Arabidopsis B-box protein, directly activates HY5 and is targeted by COP1 for 26S proteasome-mediated degradation.
Proc. Natl. Acad. Sci. U.S.A., 2016. 113(27): p. 7655-60
[PMID:27325768] - Xu DB, et al.
The G-Protein β Subunit AGB1 Promotes Hypocotyl Elongation through Inhibiting Transcription Activation Function of BBX21 in Arabidopsis.
Mol Plant, 2017. 10(9): p. 1206-1223
[PMID:28827171] - Xu D,Jiang Y,Li J,Holm M,Deng XW
The B-Box Domain Protein BBX21 Promotes Photomorphogenesis.
Plant Physiol., 2018. 176(3): p. 2365-2375
[PMID:29259103] - Job N,Yadukrishnan P,Bursch K,Datta S,Johansson H
Two B-Box Proteins Regulate Photomorphogenesis by Oppositely Modulating HY5 through their Diverse C-Terminal Domains.
Plant Physiol., 2018. 176(4): p. 2963-2976
[PMID:29439209] - Crocco CD,Ocampo GG,Ploschuk EL,Mantese A,Botto JF
Heterologous Expression of AtBBX21 Enhances the Rate of Photosynthesis and Alleviates Photoinhibition in Solanumtuberosum.
Plant Physiol., 2018. 177(1): p. 369-380
[PMID:29555784] - Kang X, et al.
HRB2 and BBX21 interaction modulates Arabidopsis ABI5 locus and stomatal aperture.
Plant Cell Environ., 2018. 41(8): p. 1912-1925
[PMID:29748960]
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